RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ADGRD2Q7Z7M1 963 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 RBM23Q86U06 439 aaKnown RBP12.07□□□□□ -0.48
SSBP4-215ENST00000625926 FAM178BQ8IXR5 827 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 EFHBQ8N7U6 833 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 ERMNQ8TAM6 284 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 PIGOQ8TEQ8 1089 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 MRPS27Q92552 414 aaKnown RBP12.07□□□□□ -0.48
SSBP4-215ENST00000625926 PGBD4Q96DM1 585 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 TLE6Q9H808 572 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 TUFT1Q9NNX1 390 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 XPNPEP1Q9NQW7 623 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 AGPAT5Q9NUQ2 364 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 SPG21Q9NZD8 308 aa12.07□□□□□ -0.48
SSBP4-215ENST00000625926 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
SSBP4-215ENST00000625926 MICAL3Q7RTP6 2002 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 LINC01565O15544 149 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 SPATA31C1P0DKV0 1188 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 U2AF2P26368 475 aaKnown RBP eCLIP12.06□□□□□ -0.48
SSBP4-215ENST00000625926 HOXA11P31270 313 aaPredicted RBP12.06□□□□□ -0.48
SSBP4-215ENST00000625926 ARL2P36404 184 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 ALDH7A1P49419 539 aaKnown RBP12.06□□□□□ -0.48
SSBP4-215ENST00000625926 NDUFV1P49821 464 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 PTENP60484 403 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 ERVFC1P60507 584 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 DLX2Q07687 328 aaPredicted RBP12.06□□□□□ -0.48
SSBP4-215ENST00000625926 LONRF3Q496Y0 759 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 GLB1LQ6UWU2 654 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 CATSPER3Q86XQ3 398 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 GJD3Q8N144 294 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 LPPQ93052 612 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 NACC1Q96RE7 527 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 CDCA3Q99618 268 aaPredicted RBP12.06□□□□□ -0.48
SSBP4-215ENST00000625926 POLR3CQ9BUI4 534 aaPredicted RBP12.06□□□□□ -0.48
SSBP4-215ENST00000625926 MINDY3Q9H8M7 445 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 NGRNQ9NPE2 291 aaKnown RBP12.06□□□□□ -0.48
SSBP4-215ENST00000625926 KIF3AQ9Y496 699 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 PCDHB2Q9Y5E7 798 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 PCDHGC5Q9Y5F6 944 aa12.06□□□□□ -0.48
SSBP4-215ENST00000625926 PRRC2BQ5JSZ5 2229 aaKnown RBP12.06□□□□□ -0.48
SSBP4-215ENST00000625926 A0A087WWV3 80 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 FSD2A1L4K1 749 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 CARNS1A5YM72 827 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 FSCN2O14926 492 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 PER2O15055 1255 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 MED24O75448 989 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 OFD1O75665 1012 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 ERLIN2O94905 339 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 AXLP30530 894 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
SSBP4-215ENST00000625926 PBX3P40426 434 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 CLUL1Q15846 466 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 NOMO2Q5JPE7 1267 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 MRPL10Q7Z7H8 261 aaKnown RBP12.05□□□□□ -0.48
SSBP4-215ENST00000625926 SLC39A11Q8N1S5 342 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 CNNM3Q8NE01 707 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 TCF25Q9BQ70 676 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 C1QTNF1Q9BXJ1 281 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 PRKAG3Q9UGI9 489 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 CD207Q9UJ71 328 aa12.05□□□□□ -0.48
SSBP4-215ENST00000625926 DBR1Q9UK59 544 aaKnown RBP12.05□□□□□ -0.48
SSBP4-215ENST00000625926 COL4A4P53420 1690 aaPredicted RBP12.04□□□□□ -0.48
SSBP4-215ENST00000625926 BDP1A6H8Y1 2624 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 MEIS3P2A8K0S8 358 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 INO80B-WBP1J3KQ70 363 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 MBTPS2O43462 519 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 USO1O60763 962 aaKnown RBP12.04□□□□□ -0.48
SSBP4-215ENST00000625926 TBX10O75333 385 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 GLRA2P23416 452 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 RPA1P27694 616 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 BCAR1P56945 870 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 RNASELQ05823 741 aaKnown RBP12.04□□□□□ -0.48
SSBP4-215ENST00000625926 SMAD4Q13485 552 aaKnown RBP12.04□□□□□ -0.48
SSBP4-215ENST00000625926 SMAD2Q15796 467 aaKnown RBP12.04□□□□□ -0.48
SSBP4-215ENST00000625926 DUSP6Q16828 381 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 UBXN11Q5T124 520 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 NOTUMQ6P988 496 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 TMC7Q7Z402 723 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
SSBP4-215ENST00000625926 C4orf32Q8N8J7 132 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 MCPH1Q8NEM0 835 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 ASAP3Q8TDY4 903 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 MSLNLQ96KJ4 702 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 NFKBIZQ9BYH8 718 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 POLR3FQ9H1D9 316 aaPredicted RBP12.04□□□□□ -0.48
SSBP4-215ENST00000625926 CD320Q9NPF0 282 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 UBN1Q9NPG3 1134 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 ENTPD7Q9NQZ7 604 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 TBC1D13Q9NVG8 400 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 CLEC1BQ9P126 229 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 KANSL3Q9P2N6 904 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 INPP5FQ9Y2H2 1132 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 ARIH1Q9Y4X5 557 aaPredicted RBP12.04□□□□□ -0.48
SSBP4-215ENST00000625926 SIP14410 1827 aa12.04□□□□□ -0.48
SSBP4-215ENST00000625926 MUC6Q6W4X9 2439 aa12.03□□□□□ -0.48
SSBP4-215ENST00000625926 TTC3P53804 2025 aa12.03□□□□□ -0.48
SSBP4-215ENST00000625926 NT5C1B-RDH14C9J2C7 533 aa12.03□□□□□ -0.48
SSBP4-215ENST00000625926 TSPAN1O60635 241 aa12.03□□□□□ -0.48
SSBP4-215ENST00000625926 ZC3H11AO75152 810 aaKnown RBP eCLIP12.03□□□□□ -0.48
SSBP4-215ENST00000625926 EYA4O95677 639 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms