RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 WDR11Q9BZH6 1224 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 CARD9Q9H257 536 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 UBE2TQ9NPD8 197 aaPredicted RBP12.19□□□□□ -0.46
VARS2-213ENST00000625423 PKD2L1Q9P0L9 805 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 SLC12A6Q9UHW9 1150 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 ATP8A1Q9Y2Q0 1164 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 DCDC2CA8MYV0 355 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 FAM107AO95990 144 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 DR1Q01658 176 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 MAPK7Q13164 816 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 CC2D2BQ6DHV5 1058 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 GLG1Q92896 1179 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 AGPAT1Q99943 283 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.19□□□□□ -0.46
VARS2-213ENST00000625423 CNOT8Q9UFF9 292 aaKnown RBP12.19□□□□□ -0.46
VARS2-213ENST00000625423 DIS3Q9Y2L1 958 aaKnown RBP12.19□□□□□ -0.46
VARS2-213ENST00000625423 TMX2Q9Y320 296 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 SCN9AQ15858 1988 aa12.19□□□□□ -0.46
VARS2-213ENST00000625423 K7ENM7 598 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
VARS2-213ENST00000625423 KIF22Q14807 665 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 KRT71Q3SY84 523 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 FBXW10Q5XX13 1052 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 SPATS2Q86XZ4 545 aaKnown RBP12.18□□□□□ -0.46
VARS2-213ENST00000625423 FMO2Q99518 471 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 STRA6Q9BX79 667 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 TEKT3Q9BXF9 490 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 KCND2Q9NZV8 630 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 EMSYQ7Z589 1322 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 KRT13P13646 458 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 GUCY2CP25092 1073 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 TRAF1Q13077 416 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 ARHGEF19Q8IW93 802 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 RAB17Q9H0T7 212 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 CHORDC1Q9UHD1 332 aaPredicted RBP12.18□□□□□ -0.46
VARS2-213ENST00000625423 ALG6Q9Y672 507 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 CAPN7Q9Y6W3 813 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 GOLGA6L10A0A0M3HER8 536 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 MUTP22033 750 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 MAGOHP61326 146 aaKnown RBP12.18□□□□□ -0.46
VARS2-213ENST00000625423 PPP2R2AP63151 447 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 AGBL2Q5U5Z8 902 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 MICALCLQ6ZW33 695 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 SLC9A9Q8IVB4 645 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 MAGOHBQ96A72 148 aaKnown RBP12.18□□□□□ -0.46
VARS2-213ENST00000625423 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 RANBP17Q9H2T7 1088 aaKnown RBP12.18□□□□□ -0.46
VARS2-213ENST00000625423 EHMT1Q9H9B1 1298 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.18□□□□□ -0.463e-6■■■■■ 42.5
VARS2-213ENST00000625423 CTTNBP2NLQ9P2B4 639 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 MRPL11Q9Y3B7 192 aaKnown RBP12.18□□□□□ -0.46
VARS2-213ENST00000625423 DAAM1Q9Y4D1 1078 aa12.18□□□□□ -0.46
VARS2-213ENST00000625423 ATXN2Q99700 1313 aaKnown RBP12.17□□□□□ -0.46
VARS2-213ENST00000625423 COL11A2P13942 1736 aaPredicted RBP12.17□□□□□ -0.46
VARS2-213ENST00000625423 CLRN2A0PK11 232 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 TMEM110-MUSTN1A8MSY1 372 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 FTLP02792 175 aaPredicted RBP12.17□□□□□ -0.46
VARS2-213ENST00000625423 BCRP11274 1271 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 PPP3CAQ08209 521 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 IFFO1Q0D2I5 559 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 RNF187Q5TA31 235 aaPredicted RBP12.17□□□□□ -0.46
VARS2-213ENST00000625423 DUPD1Q68J44 220 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 ZNF746Q6NUN9 644 aaPredicted RBP12.17□□□□□ -0.46
VARS2-213ENST00000625423 PADI6Q6TGC4 694 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 B3GNT9Q6UX72 402 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 FMNL3Q8IVF7 1028 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 NAP1L3Q99457 506 aaPredicted RBP12.17□□□□□ -0.46
VARS2-213ENST00000625423 ERP44Q9BS26 406 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 GCLMP48507 274 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 ZSWIM2Q8NEG5 633 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 CHURC1Q8WUH1 139 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 KRT35Q92764 455 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 CYFIP2Q96F07 1278 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 CBWD1Q9BRT8 395 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 FBXO28Q9NVF7 368 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 HERC5Q9UII4 1024 aaKnown RBP12.17□□□□□ -0.46
VARS2-213ENST00000625423 SYNPO2Q9UMS6 1093 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 SNX24Q9Y343 169 aa12.17□□□□□ -0.46
VARS2-213ENST00000625423 GMNCA6NCL1 334 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 PPFIA2O75334 1257 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 VCAM1P19320 739 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 USP8P40818 1118 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 MARCKSL1P49006 195 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 SETQ01105 290 aaPredicted RBP12.16□□□□□ -0.46
VARS2-213ENST00000625423 IFT88Q13099 833 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 RHOT2Q8IXI1 618 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 RPUSD2Q8IZ73 545 aaKnown RBP12.16□□□□□ -0.46
VARS2-213ENST00000625423 SH2D3AQ9BRG2 576 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 TXLNGYQ9BZA5 131 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 SRRM3A6NNA2 597 aaPredicted RBP12.16□□□□□ -0.46
VARS2-213ENST00000625423 BACH1O14867 736 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 TRAPPC3O43617 180 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 ITGB5P18084 799 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 VAMP7P51809 220 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 PLTPP55058 493 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 ICE2Q659A1 982 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 INTS8Q75QN2 995 aaKnown RBP12.16□□□□□ -0.46
VARS2-213ENST00000625423 LDHDQ86WU2 507 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms