RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ST5P78524 1137 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 SMAD2Q15796 467 aaKnown RBP4.43□□□□□ -1.7
CDKL5-208ENST00000624953 ZNF827Q17R98 1081 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 CPZQ66K79 652 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 TTLL7Q6ZT98 887 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 CXXC5Q7LFL8 322 aaKnown RBP4.43□□□□□ -1.7
CDKL5-208ENST00000624953 DDX53Q86TM3 631 aaKnown RBP4.43□□□□□ -1.7
CDKL5-208ENST00000624953 LRRTM3Q86VH5 581 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 NIM1KQ8IY84 436 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 TXNDC5Q8NBS9 432 aaKnown RBP4.43□□□□□ -1.7
CDKL5-208ENST00000624953 CXorf38Q8TB03 319 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 FEZF2Q8TBJ5 459 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 MFSD3Q96ES6 412 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 C16orf92Q96LL3 132 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 ZSWIM3Q96MP5 696 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 YIPF4Q9BSR8 244 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 HAPLN2Q9GZV7 340 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 SAMD15Q9P1V8 674 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 ZFP69BQ9UJL9 534 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 SSH2Q76I76 1423 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 RPGRIP1LQ68CZ1 1315 aa4.43□□□□□ -1.7
CDKL5-208ENST00000624953 KIAA0232Q92628 1395 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 USP54Q70EL1 1684 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 GOLGA6L22H0YM25 854 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 KCNK3O14649 394 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 F2P00734 622 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 KRT15P19012 456 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 HSD3B2P26439 372 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 MC4RP32245 332 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 BRCA1P38398 1863 aaKnown RBP4.42□□□□□ -1.7
CDKL5-208ENST00000624953 IL13RA1P78552 427 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 IRF9Q00978 393 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 TOP3AQ13472 1001 aaPredicted RBP4.42□□□□□ -1.7
CDKL5-208ENST00000624953 SEPT7Q16181 437 aaKnown RBP4.42□□□□□ -1.7
CDKL5-208ENST00000624953 SDE2Q6IQ49 451 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 RNF180Q86T96 592 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 REXO1L1PQ8IX06 675 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 BCL6BQ8N143 479 aaPredicted RBP4.42□□□□□ -1.7
CDKL5-208ENST00000624953 NUDT10Q8NFP7 164 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 DOT1LQ8TEK3 1739 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 NUDT11Q96G61 164 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 RBM15Q96T37 977 aaKnown RBP eCLIP4.42□□□□□ -1.7
CDKL5-208ENST00000624953 TARS2Q9BW92 718 aaKnown RBP4.42□□□□□ -1.7
CDKL5-208ENST00000624953 KIAA1551Q9HCM1 1747 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 SLC39A2Q9NP94 309 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 GALNT8Q9NY28 637 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 DUSP10Q9Y6W6 482 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 TRPM1Q7Z4N2 1603 aa4.42□□□□□ -1.7
CDKL5-208ENST00000624953 COL5A2P05997 1499 aaPredicted RBP4.42□□□□□ -1.7
CDKL5-208ENST00000624953 SLIT3O75094 1523 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 KIAA1210Q9ULL0 1709 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 TOGARAM1Q9Y4F4 1720 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 DDX3XO00571 662 aaKnown RBP eCLIP4.41□□□□□ -1.7
CDKL5-208ENST00000624953 OPA1O60313 960 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 B4GALT3O60512 393 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 MMEP08473 750 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 VIL1P09327 827 aaKnown RBP4.41□□□□□ -1.7
CDKL5-208ENST00000624953 JMJD7P0C870 316 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 C1QTNF8P60827 252 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 RGL3Q3MIN7 710 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 NT5DC1Q5TFE4 455 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 PIK3R6Q5UE93 754 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 TMEM200BQ69YZ2 307 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 ESRP1Q6NXG1 681 aaKnown RBP4.41□□□□□ -1.7
CDKL5-208ENST00000624953 THNSL2Q86YJ6 484 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 KLHL36Q8N4N3 616 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 FOXB1Q99853 325 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 BTBD2Q9BX70 525 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 SPON1Q9HCB6 807 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 INCENPQ9NQS7 918 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 RIC8BQ9NVN3 520 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 ARHGAP20Q9P2F6 1191 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 USP35Q9P2H5 1018 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 CNOT11Q9UKZ1 510 aaKnown RBP4.41□□□□□ -1.7
CDKL5-208ENST00000624953 SPO11Q9Y5K1 396 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 MON2Q7Z3U7 1717 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 WDR90Q96KV7 1748 aa4.41□□□□□ -1.7
CDKL5-208ENST00000624953 ITGB4P16144 1822 aa4.4□□□□□ -1.7
CDKL5-208ENST00000624953 MROH6A6NGR9 719 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 FOXP2O15409 715 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 PRICKLE3O43900 615 aaPredicted RBP4.4□□□□□ -1.71
CDKL5-208ENST00000624953 SASH1O94885 1247 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 ATP2A2P16615 1042 aaKnown RBP4.4□□□□□ -1.71
CDKL5-208ENST00000624953 CSF2RBP32927 897 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 EPHB4P54760 987 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 ALDH6A1Q02252 535 aaKnown RBP4.4□□□□□ -1.71
CDKL5-208ENST00000624953 SAFB2Q14151 953 aaKnown RBP eCLIP4.4□□□□□ -1.71
CDKL5-208ENST00000624953 EPHA7Q15375 998 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 GPR158Q5T848 1215 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 EGFLAMQ63HQ2 1017 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 TRIM68Q6AZZ1 485 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 Q6ZUG5 572 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 STPG3Q8N7X2 389 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 C2orf69Q8N8R5 385 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 MAPRE3Q9UPY8 281 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 ANKRD30BQ9BXX2 1392 aa4.4□□□□□ -1.71
CDKL5-208ENST00000624953 KIF13BQ9NQT8 1826 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 CCDC88AQ3V6T2 1871 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 UBR3Q6ZT12 1888 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 C5P01031 1676 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms