RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 PTPN22Q9Y2R2 807 aa11.71□□□□□ -0.53
CPNE3-212ENST00000621783 SCN10AQ9Y5Y9 1956 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 TISP43B9A030 160 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 CLIC2O15247 247 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 CBFA2T2O43439 604 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 MSCO60682 206 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 GJB1P08034 283 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 SCP2P22307 547 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 CDC25BP30305 580 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 ABCD1P33897 745 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 DNM2P50570 870 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 COPB1P53618 953 aaKnown RBP11.7□□□□□ -0.54
CPNE3-212ENST00000621783 UBASH3AP57075 661 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 TFDP1Q14186 410 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 HIC1Q14526 733 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 CDCA2Q69YH5 1023 aaPredicted RBP11.7□□□□□ -0.54
CPNE3-212ENST00000621783 CCSAPQ6IQ19 270 aaPredicted RBP11.7□□□□□ -0.54
CPNE3-212ENST00000621783 RHPN2Q8IUC4 686 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 GOLGA5Q8TBA6 731 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 NLRP4Q96MN2 994 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 NAP1L5Q96NT1 182 aaPredicted RBP11.7□□□□□ -0.54
CPNE3-212ENST00000621783 PPP1R9BQ96SB3 815 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 MAP7D2Q96T17 732 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.7□□□□□ -0.54
CPNE3-212ENST00000621783 INTS13Q9NVM9 706 aa11.7□□□□□ -0.54
CPNE3-212ENST00000621783 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 C17orf102A2RUQ5 167 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 MBLAC1A4D2B0 266 aaPredicted RBP11.69□□□□□ -0.54
CPNE3-212ENST00000621783 CETN3O15182 167 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 ASGR1P07306 291 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 SRGAP2CP0DJJ0 459 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 HSPA8P11142 646 aaKnown RBP11.69□□□□□ -0.54
CPNE3-212ENST00000621783 RPL13P26373 211 aaKnown RBP11.69□□□□□ -0.54
CPNE3-212ENST00000621783 HOXC8P31273 242 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 ADAM17P78536 824 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 ADAM9Q13443 819 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 KCNA10Q16322 511 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 NFRKBQ6P4R8 1299 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.69□□□□□ -0.54
CPNE3-212ENST00000621783 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 RNF180Q86T96 592 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 CREBRFQ8IUR6 639 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 ZBTB8OSQ8IWT0 167 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 RNF149Q8NC42 400 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 CTAGE1Q96RT6 745 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 CCDC113Q9H0I3 377 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 C2orf40Q9H1Z8 148 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 TMEM134Q9H6X4 195 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 CGNQ9P2M7 1197 aaKnown RBP11.69□□□□□ -0.54
CPNE3-212ENST00000621783 HDAC6Q9UBN7 1215 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 AKT3Q9Y243 479 aa11.69□□□□□ -0.54
CPNE3-212ENST00000621783 SMIM35A0A1B0GVV1 85 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 ANKRD63C9JTQ0 380 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 HNRNPDLO14979 420 aaKnown RBP11.68□□□□□ -0.54
CPNE3-212ENST00000621783 SLC16A3O15427 465 aaKnown RBP11.68□□□□□ -0.54
CPNE3-212ENST00000621783 ASAP2O43150 1006 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 GNA14O95837 355 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 PIGRP01833 764 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 VTNP04004 478 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 EDN1P05305 212 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 CYP2C9P11712 490 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 TMOD1P28289 359 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 PHKA2P46019 1235 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 MTIF2P46199 727 aaKnown RBP11.68□□□□□ -0.54
CPNE3-212ENST00000621783 CASP4P49662 377 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 CYP2J2P51589 502 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 SNRPFP62306 86 aaKnown RBP11.68□□□□□ -0.54
CPNE3-212ENST00000621783 STRN3Q13033 797 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 CCDC40Q4G0X9 1142 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 LHX8Q68G74 356 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 ARMCX5Q6P1M9 558 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 SLC39A4Q6P5W5 647 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 RUFY4Q6ZNE9 571 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 SLC9A9Q8IVB4 645 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 C12orf56Q8IXR9 622 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 C7orf31Q8N865 590 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 PCSK9Q8NBP7 692 aaKnown RBP11.68□□□□□ -0.54
CPNE3-212ENST00000621783 BICD1Q96G01 975 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 ZNF668Q96K58 619 aaPredicted RBP11.68□□□□□ -0.54
CPNE3-212ENST00000621783 PPP1R16BQ96T49 567 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 FAM49AQ9H0Q0 323 aaPredicted RBP11.68□□□□□ -0.54
CPNE3-212ENST00000621783 VPS16Q9H269 839 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 DMAC2Q9NW81 257 aa11.68□□□□□ -0.54
CPNE3-212ENST00000621783 LGALS16A8MUM7 142 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 K7ERI5 159 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 TREHO43280 583 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 AKAP3O75969 853 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 PRKCBP05771 671 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 TPM3P06753 285 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 EPB41P11171 864 aaKnown RBP11.67□□□□□ -0.54
CPNE3-212ENST00000621783 GNAT1P11488 350 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
CPNE3-212ENST00000621783 LIG4P49917 911 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 GPC3P51654 580 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 EFNA5P52803 228 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 MARSP56192 900 aaKnown RBP11.67□□□□□ -0.54
CPNE3-212ENST00000621783 PTENP60484 403 aa11.67□□□□□ -0.54
CPNE3-212ENST00000621783 ZNF200P98182 395 aaPredicted RBP11.67□□□□□ -0.54
CPNE3-212ENST00000621783 MBTD1Q05BQ5 628 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms