RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 CSRNP2Q9H175 543 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 MTG2Q9H4K7 406 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 CEP72Q9P209 647 aa7.22□□□□□ -1.25
VPS29-212ENST00000621131 MRPL42Q9Y6G3 142 aaKnown RBP7.22□□□□□ -1.25
VPS29-212ENST00000621131 MAFGO15525 162 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 CYP27B1O15528 508 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 TOX4O94842 621 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 CD40P25942 277 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 KIR2DL3P43628 341 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 HMGA2P52926 109 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 RRP1BQ14684 758 aaKnown RBP7.21□□□□□ -1.26
VPS29-212ENST00000621131 SEPT7Q16181 437 aaKnown RBP7.21□□□□□ -1.26
VPS29-212ENST00000621131 PASD1Q8IV76 773 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 ANKRD35Q8N283 1001 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 SMC1BQ8NDV3 1235 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 PPP1R14CQ8TAE6 165 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 ZNF496Q96IT1 587 aaPredicted RBP7.21□□□□□ -1.26
VPS29-212ENST00000621131 TARS2Q9BW92 718 aaKnown RBP7.21□□□□□ -1.26
VPS29-212ENST00000621131 KRTAP9-8Q9BYQ0 159 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 ING1Q9UK53 422 aaPredicted RBP7.21□□□□□ -1.26
VPS29-212ENST00000621131 CFTRP13569 1480 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 MYPNQ86TC9 1320 aa7.21□□□□□ -1.26
VPS29-212ENST00000621131 CADPSQ9ULU8 1353 aa7.2□□□□□ -1.26
VPS29-212ENST00000621131 EEA1Q15075 1411 aa7.2□□□□□ -1.26
VPS29-212ENST00000621131 JUNP05412 331 aaKnown RBP7.2□□□□□ -1.26
VPS29-212ENST00000621131 GPR158Q5T848 1215 aa7.2□□□□□ -1.26
VPS29-212ENST00000621131 FNDC7Q5VTL7 733 aa7.2□□□□□ -1.26
VPS29-212ENST00000621131 MIEF2Q96C03 454 aa7.2□□□□□ -1.26
VPS29-212ENST00000621131 TCF25Q9BQ70 676 aa7.2□□□□□ -1.26
VPS29-212ENST00000621131 NOL10Q9BSC4 688 aaKnown RBP7.2□□□□□ -1.26
VPS29-212ENST00000621131 IL23AQ9NPF7 189 aa7.2□□□□□ -1.26
VPS29-212ENST00000621131 BIVM-ERCC5R4GMW8 1640 aa7.19□□□□□ -1.26
VPS29-212ENST00000621131 CEP164Q9UPV0 1460 aa7.19□□□□□ -1.26
VPS29-212ENST00000621131 CDC45O75419 566 aa7.19□□□□□ -1.26
VPS29-212ENST00000621131 SCNN1BP51168 640 aa7.19□□□□□ -1.26
VPS29-212ENST00000621131 SCNN1GP51170 649 aa7.19□□□□□ -1.26
VPS29-212ENST00000621131 KPNA1P52294 538 aaPredicted RBP7.19□□□□□ -1.26
VPS29-212ENST00000621131 KIAA0907Q7Z7F0 614 aaPredicted RBP7.19□□□□□ -1.26
VPS29-212ENST00000621131 AHI1Q8N157 1196 aa7.19□□□□□ -1.26
VPS29-212ENST00000621131 PPM1KQ8N3J5 372 aa7.19□□□□□ -1.26
VPS29-212ENST00000621131 FEZ1Q99689 392 aa7.19□□□□□ -1.26
VPS29-212ENST00000621131 C14orf93Q9H972 538 aaKnown RBP7.19□□□□□ -1.26
VPS29-212ENST00000621131 SPTLC3Q9NUV7 552 aa7.19□□□□□ -1.26
VPS29-212ENST00000621131 ZNF202O95125 648 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 PHC1P78364 1004 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 MAN2A1Q16706 1144 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 Q6ZRM9 215 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 CMTM4Q8IZR5 234 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 HIST1H2AHQ96KK5 128 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 GPR101Q96P66 508 aaPredicted RBP7.18□□□□□ -1.26
VPS29-212ENST00000621131 HIST1H2AJQ99878 128 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 USP36Q9P275 1121 aaKnown RBP7.18□□□□□ -1.26
VPS29-212ENST00000621131 MSRAQ9UJ68 235 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 PLAAQ9Y263 795 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 TOP2BQ02880 1626 aa7.18□□□□□ -1.26
VPS29-212ENST00000621131 SYNJ1O43426 1573 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 MTSS1O43312 755 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 FSBPO95073 299 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 PCDH8O95206 1070 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 GAAP10253 952 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 TUBA3CQ13748 450 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 ELAVL1Q15717 326 aaKnown RBP7.17□□□□□ -1.26
VPS29-212ENST00000621131 ZBTB41Q5SVQ8 909 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 FKBP15Q5T1M5 1219 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 KRT40Q6A162 431 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 TUBA3EQ6PEY2 450 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 ESPNLQ6ZVH7 1005 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 NPM2Q86SE8 214 aaKnown RBP7.17□□□□□ -1.26
VPS29-212ENST00000621131 GSPT2Q8IYD1 628 aaKnown RBP7.17□□□□□ -1.26
VPS29-212ENST00000621131 ZNF610Q8N9Z0 462 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 MFSD3Q96ES6 412 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 RCAN3Q9UKA8 241 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 XDHP47989 1333 aa7.17□□□□□ -1.26
VPS29-212ENST00000621131 LCHNA4D1U4 455 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 PFKMP08237 780 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 CD69Q07108 199 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 ABHD18Q0P651 414 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 TERF2Q15554 542 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 PIK3C3Q8NEB9 887 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 UIMC1Q96RL1 719 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 ENKD1Q9H0I2 346 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 MS4A5Q9H3V2 200 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS29-212ENST00000621131 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS29-212ENST00000621131 PARPBPQ9NWS1 579 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 ING3Q9NXR8 418 aa7.16□□□□□ -1.26
VPS29-212ENST00000621131 A0A087X0B3 334 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 PRSS38A1L453 326 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 GSG1L2A8MUP6 293 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 LSP1P33241 339 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 MCM7P33993 719 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 ADCYAP1R1P41586 468 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 LSSP48449 732 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 RABGGTBP53611 331 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 CRHR2Q13324 411 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 SPIDRQ14159 915 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 FHL2Q14192 279 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 OR2W6PQ8NHA6 318 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 ZNF512Q96ME7 567 aaPredicted RBP7.15□□□□□ -1.26
VPS29-212ENST00000621131 TMPRSS11EQ9UL52 423 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms