RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ZNF658Q5TYW1 1059 aaPredicted RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 LRIG3Q6UXM1 1119 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 BLIDQ8IZY5 108 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 TBC1D22AQ8WUA7 517 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 TGS1Q96RS0 853 aaKnown RBP7.62□□□□□ -1.19
COLCA1-205ENST00000620864 APOL6Q9BWW8 343 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 FOXP3Q9BZS1 431 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 SLC8A2Q9UPR5 921 aa7.62□□□□□ -1.19
COLCA1-205ENST00000620864 METP08581 1390 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 TARBP1Q13395 1621 aaKnown RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 RIMS1Q86UR5 1692 aaKnown RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 TESPA1A2RU30 521 aaPredicted RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 WDR64B1ANS9 1081 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 SNX2O60749 519 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 ARMCX4Q5H9R4 360 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CC2D1AQ6P1N0 951 aaPredicted RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CAPN12Q6ZSI9 719 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CCDC80Q76M96 950 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 KCTD6Q8NC69 237 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 TTC8Q8TAM2 541 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 LARP4BQ92615 738 aaKnown RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 ZNF556Q9HAH1 456 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 HACL1Q9UJ83 578 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 MOSPD1Q9UJG1 213 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 POLR1AO95602 1720 aaPredicted RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 DCDC2CA8MYV0 355 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 B4E1Z4 1266 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 H0Y3Z8 333 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 TLR3O15455 904 aaKnown RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 HSPD1P10809 573 aaKnown RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CSTF3Q12996 717 aaKnown RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 DNAJC24Q6P3W2 148 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 BBS7Q8IWZ6 715 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 NELFCDQ8IXH7 590 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 K7ENM7 598 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CYP2J2P51589 502 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 C2orf54Q08AI8 447 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 TFCP2Q12800 502 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 PASD1Q8IV76 773 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CCDC103Q8IW40 242 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 SLC26A7Q8TE54 656 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 DNAJC9Q8WXX5 260 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 ANKRD36BP1Q96IX9 119 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 KDRP35968 1356 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 ADGRA3Q8IWK6 1321 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 SAC3D1A6NKF1 404 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 KLHL2O95198 593 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 DEFB115Q30KQ5 88 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 BTNL9Q6UXG8 535 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 SIX5Q8N196 739 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 PPM1KQ8N3J5 372 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CATSPER2Q96P56 530 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 MMS19Q96T76 1030 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 SLC7A5P2Q9GIP4 190 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CLEC4MQ9H2X3 399 aaPredicted RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 NFU1Q9UMS0 254 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 PCDHA12Q9UN75 941 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 PCDHA13Q9Y5I0 950 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 STX7O15400 261 aaKnown RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CENPPQ6IPU0 288 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 RRM2BQ7LG56 351 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CHURC1Q8WUH1 139 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 BPIFA3Q9BQP9 254 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 SEL1LQ9UBV2 794 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 PTPRMP28827 1452 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 PITPNM2Q9BZ72 1349 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 BIRC5O15392 142 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 KRT14P02533 472 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 TMOD1P28289 359 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 CHRNA3P32297 505 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 PGM1P36871 562 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 PTH1RQ03431 593 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 DHX34Q14147 1143 aaKnown RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 ARMCX5Q6P1M9 558 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 MYLK4Q86YV6 388 aaPredicted RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 TAGAPQ8N103 731 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 SIX6OS1Q8N1H7 587 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 P2RX5Q93086 422 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 MXD3Q9BW11 206 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 PIGUQ9H490 435 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 OLA1Q9NTK5 396 aaKnown RBP7.61□□□□□ -1.19
COLCA1-205ENST00000620864 ADA2Q9NZK5 511 aa7.61□□□□□ -1.19
COLCA1-205ENST00000620864 DMC1Q14565 340 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 VPS72Q15906 364 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 APOA5Q6Q788 366 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 CROCCP3Q8IVE0 287 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 ZNF496Q96IT1 587 aaPredicted RBP7.6□□□□□ -1.19
COLCA1-205ENST00000620864 PHACTR3Q96KR7 559 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 LZTS1Q9Y250 596 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 PRPSAP2O60256 369 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 ZBED1O96006 694 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 VCAM1P19320 739 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 LAMB3Q13751 1172 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 C12orf50Q8NA57 414 aaPredicted RBP7.6□□□□□ -1.19
COLCA1-205ENST00000620864 SMYD3Q9H7B4 428 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 EDC4Q6P2E9 1401 aaKnown RBP7.6□□□□□ -1.19
COLCA1-205ENST00000620864 GPAA1O43292 621 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 CHRNA5P30532 468 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 YAF2Q8IY57 180 aa7.6□□□□□ -1.19
COLCA1-205ENST00000620864 RAPGEF5Q92565 580 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms