RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 CWH43Q9H720 699 aa17.43■□□□□ 0.38
LINC00221-202ENST00000619530 TUFT1Q9NNX1 390 aa17.43■□□□□ 0.38
LINC00221-202ENST00000619530 XPNPEP1Q9NQW7 623 aa17.43■□□□□ 0.38
LINC00221-202ENST00000619530 SMC3Q9UQE7 1217 aa17.43■□□□□ 0.38
LINC00221-202ENST00000619530 PCDHB6Q9Y5E3 794 aa17.43■□□□□ 0.38
LINC00221-202ENST00000619530 ARID2Q68CP9 1835 aa17.42■□□□□ 0.38
LINC00221-202ENST00000619530 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.42■□□□□ 0.38
LINC00221-202ENST00000619530 GAS2O43903 313 aaKnown RBP17.42■□□□□ 0.38
LINC00221-202ENST00000619530 USO1O60763 962 aaKnown RBP17.42■□□□□ 0.38
LINC00221-202ENST00000619530 XRCC6P12956 609 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC00221-202ENST00000619530 PHKA2P46019 1235 aa17.42■□□□□ 0.38
LINC00221-202ENST00000619530 RARRES1P49788 294 aa17.42■□□□□ 0.38
LINC00221-202ENST00000619530 PTGDRQ13258 359 aa17.42■□□□□ 0.38
LINC00221-202ENST00000619530 CAMK1Q14012 370 aa17.42■□□□□ 0.38
LINC00221-202ENST00000619530 MXD4Q14582 209 aaPredicted RBP17.42■□□□□ 0.38
LINC00221-202ENST00000619530 SKOR2Q2VWA4 1001 aaPredicted RBP17.42■□□□□ 0.38
LINC00221-202ENST00000619530 L1TD1Q5T7N2 865 aaKnown RBP17.42■□□□□ 0.38
LINC00221-202ENST00000619530 C4orf32Q8N8J7 132 aa17.42■□□□□ 0.38
LINC00221-202ENST00000619530 ERMNQ8TAM6 284 aa17.42■□□□□ 0.38
LINC00221-202ENST00000619530 NACC1Q96RE7 527 aa17.42■□□□□ 0.38
LINC00221-202ENST00000619530 POLR3CQ9BUI4 534 aaPredicted RBP17.42■□□□□ 0.38
LINC00221-202ENST00000619530 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
LINC00221-202ENST00000619530 DGAT1O75907 488 aa17.41■□□□□ 0.38
LINC00221-202ENST00000619530 FGF18O76093 207 aa17.41■□□□□ 0.38
LINC00221-202ENST00000619530 ATF7P17544 494 aaPredicted RBP17.41■□□□□ 0.38
LINC00221-202ENST00000619530 IRS1P35568 1242 aa17.41■□□□□ 0.38
LINC00221-202ENST00000619530 CUL4AQ13619 759 aa17.41■□□□□ 0.38
LINC00221-202ENST00000619530 TFDP1Q14186 410 aa17.41■□□□□ 0.38
LINC00221-202ENST00000619530 POTEGQ6S5H5 508 aa17.41■□□□□ 0.38
LINC00221-202ENST00000619530 ZNF598Q86UK7 904 aaKnown RBP17.41■□□□□ 0.38
LINC00221-202ENST00000619530 ASAP3Q8TDY4 903 aa17.41■□□□□ 0.38
LINC00221-202ENST00000619530 POLR3FQ9H1D9 316 aaPredicted RBP17.41■□□□□ 0.38
LINC00221-202ENST00000619530 LRWD1Q9UFC0 647 aa17.41■□□□□ 0.38
LINC00221-202ENST00000619530 TTC28Q96AY4 2481 aa17.41■□□□□ 0.38
LINC00221-202ENST00000619530 H3BQ06 376 aaPredicted RBP17.4■□□□□ 0.38
LINC00221-202ENST00000619530 TNFRSF10AO00220 468 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 SKIP12755 728 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 LAG3P18627 525 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 GTF2F1P35269 517 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC00221-202ENST00000619530 CCT6AP40227 531 aaKnown RBP17.4■□□□□ 0.38
LINC00221-202ENST00000619530 PBX3P40426 434 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 HYAL1Q12794 435 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 RBM23Q86U06 439 aaKnown RBP17.4■□□□□ 0.38
LINC00221-202ENST00000619530 GPRC5CQ9NQ84 441 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 AGPAT5Q9NUQ2 364 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 FAM105AQ9NUU6 356 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 INPP5FQ9Y2H2 1132 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 PCDHB2Q9Y5E7 798 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 PCDHGC5Q9Y5F6 944 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 XIRP2A4UGR9 3374 aa17.4■□□□□ 0.38
LINC00221-202ENST00000619530 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.37
LINC00221-202ENST00000619530 ERLIN2O94905 339 aa17.39■□□□□ 0.37
LINC00221-202ENST00000619530 GLRA2P23416 452 aa17.39■□□□□ 0.37
LINC00221-202ENST00000619530 RPA1P27694 616 aa17.39■□□□□ 0.37
LINC00221-202ENST00000619530 ARL2P36404 184 aa17.39■□□□□ 0.37
LINC00221-202ENST00000619530 LRRC43Q8N309 656 aa17.39■□□□□ 0.37
LINC00221-202ENST00000619530 PABPC5Q96DU9 382 aaKnown RBP17.39■□□□□ 0.37
LINC00221-202ENST00000619530 ZNF558Q96NG5 402 aa17.39■□□□□ 0.37
LINC00221-202ENST00000619530 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.39■□□□□ 0.37
LINC00221-202ENST00000619530 ATG2AQ2TAZ0 1938 aa17.39■□□□□ 0.37
LINC00221-202ENST00000619530 PLXNA4Q9HCM2 1894 aa17.39■□□□□ 0.37
LINC00221-202ENST00000619530 SPTBN5Q9NRC6 3674 aaKnown RBP17.39■□□□□ 0.37
LINC00221-202ENST00000619530 ARHGEF35A5YM69 484 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 MEIS3P2A8K0S8 358 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 HOXA11P31270 313 aaPredicted RBP17.38■□□□□ 0.37
LINC00221-202ENST00000619530 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00221-202ENST00000619530 PTENP60484 403 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 NCBP1Q09161 790 aaKnown RBP17.38■□□□□ 0.37
LINC00221-202ENST00000619530 CAPSQ13938 189 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 LEXMQ3ZCV2 418 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 LARP1BQ659C4 914 aaKnown RBP17.38■□□□□ 0.37
LINC00221-202ENST00000619530 KCNT2Q6UVM3 1135 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 GLB1LQ6UWU2 654 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 ADGRD2Q7Z7M1 963 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.38■□□□□ 0.37
LINC00221-202ENST00000619530 PGBD4Q96DM1 585 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 INTS4Q96HW7 963 aaKnown RBP17.38■□□□□ 0.37
LINC00221-202ENST00000619530 CPB2Q96IY4 423 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 POLD4Q9HCU8 107 aa17.38■□□□□ 0.37
LINC00221-202ENST00000619530 DBR1Q9UK59 544 aaKnown RBP17.38■□□□□ 0.37
LINC00221-202ENST00000619530 LINC01565O15544 149 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 NCK2O43639 380 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 NRIP1P48552 1158 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 RAB27AP51159 221 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 ERVFC1P60507 584 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 CLUL1Q15846 466 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 ECM1Q16610 540 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 CSPP1Q1MSJ5 1256 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 PTCRAQ6ISU1 281 aaPredicted RBP17.37■□□□□ 0.37
LINC00221-202ENST00000619530 PADI6Q6TGC4 694 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 TRAIPQ9BWF2 469 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 SPG21Q9NZD8 308 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 PUF60Q9UHX1 559 aaKnown RBP17.37■□□□□ 0.37
LINC00221-202ENST00000619530 KIAA1024Q9UPX6 916 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 LRRIQ4A6NIV6 560 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 NT5C1B-RDH14C9J2C7 533 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 PER2O15055 1255 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 TSPAN1O60635 241 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 OFD1O75665 1012 aa17.37■□□□□ 0.37
LINC00221-202ENST00000619530 CDC25AP30304 524 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 234.9 ms