RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 UBAC1Q9BSL1 405 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 PRKD2Q9BZL6 878 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 TELO2Q9Y4R8 837 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 PCDHGA5Q9Y5G8 931 aa5.22□□□□□ -1.57
SNCA-213ENST00000618500 TICRRQ7Z2Z1 1910 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 NOTCH4Q99466 2003 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 FAM221BA6H8Z2 402 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 MEIS1O00470 390 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 SREBF1P36956 1147 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 CLK2P49760 499 aaKnown RBP5.21□□□□□ -1.57
SNCA-213ENST00000618500 CCR3P51677 355 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 NMIQ13287 307 aaPredicted RBP5.21□□□□□ -1.57
SNCA-213ENST00000618500 FZD5Q13467 585 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 ZNF589Q86UQ0 364 aaPredicted RBP5.21□□□□□ -1.57
SNCA-213ENST00000618500 BCL7CQ8WUZ0 217 aaPredicted RBP5.21□□□□□ -1.57
SNCA-213ENST00000618500 COL26A1Q96A83 441 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 RRP36Q96EU6 259 aaKnown RBP5.21□□□□□ -1.57
SNCA-213ENST00000618500 FAM49AQ9H0Q0 323 aaPredicted RBP5.21□□□□□ -1.57
SNCA-213ENST00000618500 CPVLQ9H3G5 476 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 MAN1C1Q9NR34 630 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 MRPL17Q9NRX2 175 aaKnown RBP5.21□□□□□ -1.57
SNCA-213ENST00000618500 CDH7Q9ULB5 785 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 MAFFQ9ULX9 164 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 NID2Q14112 1375 aa5.21□□□□□ -1.57
SNCA-213ENST00000618500 IGKV6-21A0A0C4DH24 114 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 CALM1P0DP23 149 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 CALM2P0DP24 149 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 CALM3P0DP25 149 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 EIF4BP23588 611 aaKnown RBP5.21□□□□□ -1.58
SNCA-213ENST00000618500 KIF5BP33176 963 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 GPC3P51654 580 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 NOMO2Q5JPE7 1267 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 ZNF280BQ86YH2 543 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 URGCPQ8TCY9 931 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 HINFPQ9BQA5 517 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 INO80BQ9C086 356 aaPredicted RBP5.21□□□□□ -1.58
SNCA-213ENST00000618500 NT5C3AQ9H0P0 336 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 NRDE2Q9H7Z3 1164 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 CDHR5Q9HBB8 845 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 CHST7Q9NS84 486 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 SPATA6Q9NWH7 488 aaPredicted RBP5.21□□□□□ -1.58
SNCA-213ENST00000618500 HCSTQ9UBK5 93 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 CA14Q9ULX7 337 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 MTMR7Q9Y216 660 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 OFD1O75665 1012 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 ZMYND10O75800 440 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 CFHP08603 1231 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 AXDND1Q5T1B0 1012 aaPredicted RBP5.21□□□□□ -1.58
SNCA-213ENST00000618500 DCLK2Q8N568 766 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 RIN2Q8WYP3 895 aaPredicted RBP5.21□□□□□ -1.58
SNCA-213ENST00000618500 ELSPBP1Q96BH3 223 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 FAM227BQ96M60 508 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 ZNF302Q9NR11 478 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 TOMM22Q9NS69 142 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 TBC1D22BQ9NU19 505 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 TBC1D13Q9NVG8 400 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 FBXW11Q9UKB1 542 aa5.21□□□□□ -1.58
SNCA-213ENST00000618500 UPK3BL1B0FP48 263 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 B4E1Z4 1266 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 UPK3BL2E5RIL1 263 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 DHX16O60231 1041 aaKnown RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 GLUD1P00367 558 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 CNPP09543 421 aaKnown RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 ARP10275 920 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 CHRM1P11229 460 aaPredicted RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 NCLP19338 710 aaKnown RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 RFX1P22670 979 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 SFPQP23246 707 aaKnown RBP eCLIP5.2□□□□□ -1.58
SNCA-213ENST00000618500 TMOD1P28289 359 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 SLC11A1P49279 550 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 GLUD2P49448 558 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 PDE1AP54750 535 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 DSC1Q08554 894 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 ITGB3BPQ13352 177 aaPredicted RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 HDAC1Q13547 482 aaPredicted RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 TARBP2Q15633 366 aaKnown RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 PLA2G2CQ5R387 149 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 ZBTB41Q5SVQ8 909 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 FCHSD1Q86WN1 690 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 EXOC8Q8IYI6 725 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 HELQQ8TDG4 1101 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 MAP7D2Q96T17 732 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 NIFKQ9BYG3 293 aaKnown RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 TRPV4Q9HBA0 871 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 RIC8AQ9NPQ8 531 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 SH2B1Q9NRF2 756 aaPredicted RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 KCNH7Q9NS40 1196 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 RAB23Q9ULC3 237 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 NUMBLQ9Y6R0 609 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 SHISA7A6NL88 538 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 DHX15O43143 795 aaKnown RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 URODP06132 367 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 SDSP20132 328 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 ATP4AP20648 1035 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 MARK3P27448 753 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 WEE1P30291 646 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 AXLP30530 894 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 RCAN1P53805 252 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 CSTF1Q05048 431 aaKnown RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 UVSSAQ2YD98 709 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms