RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 INTS4Q96HW7 963 aaKnown RBP17.78■□□□□ 0.44
BRCA1-228ENST00000618469 NACC1Q96RE7 527 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 INO80BQ9C086 356 aaPredicted RBP17.78■□□□□ 0.44
BRCA1-228ENST00000618469 IFT122Q9HBG6 1241 aa17.78■□□□□ 0.44
BRCA1-228ENST00000618469 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
BRCA1-228ENST00000618469 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
BRCA1-228ENST00000618469 PIN4Q9Y237 131 aaKnown RBP17.78■□□□□ 0.44
BRCA1-228ENST00000618469 IL17AQ16552 155 aa17.77■□□□□ 0.44
BRCA1-228ENST00000618469 ASAP3Q8TDY4 903 aa17.77■□□□□ 0.44
BRCA1-228ENST00000618469 SNX21Q969T3 373 aa17.77■□□□□ 0.44
BRCA1-228ENST00000618469 POLR3FQ9H1D9 316 aaPredicted RBP17.77■□□□□ 0.44
BRCA1-228ENST00000618469 TMEM161AQ9NX61 479 aa17.77■□□□□ 0.44
BRCA1-228ENST00000618469 MRPL42Q9Y6G3 142 aaKnown RBP17.77■□□□□ 0.44
BRCA1-228ENST00000618469 ZNF318Q5VUA4 2279 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 ARHGEF35A5YM69 484 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 LINC00271P0C7V0 271 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 FGFR1P11362 822 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
BRCA1-228ENST00000618469 SYT1P21579 422 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 IRS1P35568 1242 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 PHKA2P46019 1235 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 TFDP1Q14186 410 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 PDIA5Q14554 519 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 MXD4Q14582 209 aaPredicted RBP17.76■□□□□ 0.43
BRCA1-228ENST00000618469 ECM1Q16610 540 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 PTPROQ16827 1216 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 KRT79Q5XKE5 535 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 TWF2Q6IBS0 349 aaKnown RBP17.76■□□□□ 0.43
BRCA1-228ENST00000618469 MAEAQ7L5Y9 396 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 RNF169Q8NCN4 708 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 DDX19AQ9NUU7 478 aaKnown RBP17.76■□□□□ 0.43
BRCA1-228ENST00000618469 DACT1Q9NYF0 836 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 MUTYHQ9UIF7 546 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 RWDD3Q9Y3V2 267 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 STK24Q9Y6E0 443 aa17.76■□□□□ 0.43
BRCA1-228ENST00000618469 MYH15Q9Y2K3 1946 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 VWA3AA6NCI4 1184 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 TBKBP1A7MCY6 615 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 ASAP2O43150 1006 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 MUTP22033 750 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 DLX2Q07687 328 aaPredicted RBP17.75■□□□□ 0.43
BRCA1-228ENST00000618469 CAPSQ13938 189 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 PUS10Q3MIT2 529 aaKnown RBP17.75■□□□□ 0.43
BRCA1-228ENST00000618469 TIGD5Q53EQ6 642 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 FAM102BQ5T8I3 360 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 PADI6Q6TGC4 694 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 SRGAP1Q7Z6B7 1085 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 ECHDC2Q86YB7 292 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 MCPH1Q8NEM0 835 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 CLP1Q92989 425 aaKnown RBP17.75■□□□□ 0.43
BRCA1-228ENST00000618469 PABPC5Q96DU9 382 aaKnown RBP17.75■□□□□ 0.43
BRCA1-228ENST00000618469 SNX27Q96L92 541 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 ELAC1Q9H777 363 aaKnown RBP17.75■□□□□ 0.43
BRCA1-228ENST00000618469 MINDY3Q9H8M7 445 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 GPRC5CQ9NQ84 441 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 AGPAT5Q9NUQ2 364 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 KIAA1024Q9UPX6 916 aa17.75■□□□□ 0.43
BRCA1-228ENST00000618469 TRIOO75962 3097 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 H3BNC9 293 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 GLRA2P23416 452 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 CDC25AP30304 524 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 GTF2F1P35269 517 aaKnown RBP eCLIP17.74■□□□□ 0.434e-8■■■□□ 16.5
BRCA1-228ENST00000618469 ARL2P36404 184 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 LTBRP36941 435 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 FAM189BP81408 668 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 ZRSR1Q15695 479 aaKnown RBP17.74■□□□□ 0.43
BRCA1-228ENST00000618469 BHMT2Q9H2M3 363 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 IGFLR1Q9H665 355 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 CHST12Q9NRB3 414 aa17.74■□□□□ 0.43
BRCA1-228ENST00000618469 A0A0U1RQF3 1178 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 C19orf67A6NJJ6 358 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 INO80B-WBP1J3KQ70 363 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 HOXA2O43364 376 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 ERLIN2O94905 339 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 ATF7P17544 494 aaPredicted RBP17.73■□□□□ 0.43
BRCA1-228ENST00000618469 PTENP60484 403 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 RESTQ13127 1097 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 ARL6IP4Q66PJ3 421 aaKnown RBP17.73■□□□□ 0.43
BRCA1-228ENST00000618469 ADHFE1Q8IWW8 467 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 ABI1Q8IZP0 508 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 MMTAG2Q9BU76 263 aaKnown RBP17.73■□□□□ 0.43
BRCA1-228ENST00000618469 C11orf84Q9BUA3 381 aaPredicted RBP17.73■□□□□ 0.43
BRCA1-228ENST00000618469 NSUN3Q9H649 340 aaKnown RBP17.73■□□□□ 0.43
BRCA1-228ENST00000618469 RNF19AQ9NV58 838 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 HCSTQ9UBK5 93 aa17.73■□□□□ 0.43
BRCA1-228ENST00000618469 TECTAO75443 2155 aa17.72■□□□□ 0.43
BRCA1-228ENST00000618469 LRRIQ4A6NIV6 560 aa17.72■□□□□ 0.43
BRCA1-228ENST00000618469 C5orf67F2Z3F1 127 aa17.72■□□□□ 0.43
BRCA1-228ENST00000618469 BMP15O95972 392 aa17.72■□□□□ 0.43
BRCA1-228ENST00000618469 HSP90AA1P07900 732 aaKnown RBP17.72■□□□□ 0.43
BRCA1-228ENST00000618469 BMPR1AP36894 532 aa17.72■□□□□ 0.43
BRCA1-228ENST00000618469 SF3A1Q15459 793 aaKnown RBP17.72■□□□□ 0.43
BRCA1-228ENST00000618469 SPOUT1Q5T280 376 aaKnown RBP17.72■□□□□ 0.43
BRCA1-228ENST00000618469 IER5LQ5T953 404 aa17.72■□□□□ 0.43
BRCA1-228ENST00000618469 TMEM117Q9H0C3 514 aa17.72■□□□□ 0.43
BRCA1-228ENST00000618469 FAM105AQ9NUU6 356 aa17.72■□□□□ 0.43
BRCA1-228ENST00000618469 MTMR6Q9Y217 621 aa17.72■□□□□ 0.43
BRCA1-228ENST00000618469 PLXNA4Q9HCM2 1894 aa17.71■□□□□ 0.43
BRCA1-228ENST00000618469 E9PMD0 336 aa17.71■□□□□ 0.43
BRCA1-228ENST00000618469 LINC01565O15544 149 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms