RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 ANKEF1Q9NU02 776 aa24.6■■□□□ 1.53
SYNGR3-206ENST00000618464 CD2BP2O95400 341 aaKnown RBP24.59■■□□□ 1.53
SYNGR3-206ENST00000618464 EOMESO95936 686 aa24.59■■□□□ 1.53
SYNGR3-206ENST00000618464 PLA2G5P39877 138 aa24.59■■□□□ 1.53
SYNGR3-206ENST00000618464 PBX3P40426 434 aa24.59■■□□□ 1.53
SYNGR3-206ENST00000618464 PHKA2P46019 1235 aa24.59■■□□□ 1.53
SYNGR3-206ENST00000618464 ADGRD2Q7Z7M1 963 aa24.59■■□□□ 1.53
SYNGR3-206ENST00000618464 RNF149Q8NC42 400 aa24.59■■□□□ 1.53
SYNGR3-206ENST00000618464 LPPQ93052 612 aa24.59■■□□□ 1.53
SYNGR3-206ENST00000618464 LINC01565O15544 149 aa24.58■■□□□ 1.53
SYNGR3-206ENST00000618464 NCK2O43639 380 aa24.58■■□□□ 1.53
SYNGR3-206ENST00000618464 CLUL1Q15846 466 aa24.58■■□□□ 1.53
SYNGR3-206ENST00000618464 SRGAP1Q7Z6B7 1085 aa24.58■■□□□ 1.53
SYNGR3-206ENST00000618464 MICAL1Q8TDZ2 1067 aa24.58■■□□□ 1.53
SYNGR3-206ENST00000618464 AGPAT5Q9NUQ2 364 aa24.58■■□□□ 1.53
SYNGR3-206ENST00000618464 FAM105AQ9NUU6 356 aa24.58■■□□□ 1.53
SYNGR3-206ENST00000618464 NOL7Q9UMY1 257 aaKnown RBP24.58■■□□□ 1.53
SYNGR3-206ENST00000618464 MED24O75448 989 aa24.57■■□□□ 1.52
SYNGR3-206ENST00000618464 SPATA31C1P0DKV0 1188 aa24.57■■□□□ 1.52
SYNGR3-206ENST00000618464 RARRES1P49788 294 aa24.57■■□□□ 1.52
SYNGR3-206ENST00000618464 FAM122AQ96E09 287 aa24.57■■□□□ 1.52
SYNGR3-206ENST00000618464 TMX3Q96JJ7 454 aa24.57■■□□□ 1.52
SYNGR3-206ENST00000618464 ZNF558Q96NG5 402 aa24.57■■□□□ 1.52
SYNGR3-206ENST00000618464 MEIS3P2A8K0S8 358 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 ASAP2O43150 1006 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 USO1O60763 962 aaKnown RBP24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 ZP2Q05996 745 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 ORC2Q13416 577 aaPredicted RBP24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 CSPP1Q1MSJ5 1256 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 KCNT2Q6UVM3 1135 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 RBM23Q86U06 439 aaKnown RBP24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 CATSPER3Q86XQ3 398 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 ASAP3Q8TDY4 903 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 PPP2R3CQ969Q6 453 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 TRAIPQ9BWF2 469 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 TUFT1Q9NNX1 390 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 TLR9Q9NR96 1032 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 FAM50BQ9Y247 325 aa24.56■■□□□ 1.52
SYNGR3-206ENST00000618464 TBX10O75333 385 aa24.55■■□□□ 1.52
SYNGR3-206ENST00000618464 DGAT1O75907 488 aa24.55■■□□□ 1.52
SYNGR3-206ENST00000618464 SKIP12755 728 aa24.55■■□□□ 1.52
SYNGR3-206ENST00000618464 U2AF2P26368 475 aaKnown RBP eCLIP24.55■■□□□ 1.52
SYNGR3-206ENST00000618464 TRAPPC10P48553 1259 aa24.55■■□□□ 1.52
SYNGR3-206ENST00000618464 UBE3AQ05086 875 aa24.55■■□□□ 1.52
SYNGR3-206ENST00000618464 MXD4Q14582 209 aaPredicted RBP24.55■■□□□ 1.52
SYNGR3-206ENST00000618464 MAEAQ7L5Y9 396 aa24.55■■□□□ 1.52
SYNGR3-206ENST00000618464 INPP5FQ9Y2H2 1132 aa24.55■■□□□ 1.52
SYNGR3-206ENST00000618464 ERLIN2O94905 339 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 NRIP1P48552 1158 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 RAB27AP51159 221 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 ERVFC1P60507 584 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 ADAM15Q13444 863 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 MCTP1Q6DN14 999 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 POTEGQ6S5H5 508 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 ERMNQ8TAM6 284 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 TBC1D32Q96NH3 1257 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 MRPL9Q9BYD2 267 aaKnown RBP24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 POLR3FQ9H1D9 316 aaPredicted RBP24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 PRKAG3Q9UGI9 489 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 HCN4Q9Y3Q4 1203 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 KIF3AQ9Y496 699 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 PCDHB2Q9Y5E7 798 aa24.54■■□□□ 1.52
SYNGR3-206ENST00000618464 C19orf67A6NJJ6 358 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 MBTPS2O43462 519 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 HOXA11P31270 313 aaPredicted RBP24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 ARL2P36404 184 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 TOB1P50616 345 aaPredicted RBP24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 PTENP60484 403 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 CAPSQ13938 189 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 TFDP1Q14186 410 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 SMAD2Q15796 467 aaKnown RBP24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 GLB1LQ6UWU2 654 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 ADHFE1Q8IWW8 467 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 C4orf32Q8N8J7 132 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 MRPS27Q92552 414 aaKnown RBP24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 POLR3CQ9BUI4 534 aaPredicted RBP24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 TLE6Q9H808 572 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 GPRC5CQ9NQ84 441 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 SPG21Q9NZD8 308 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 PCDHB6Q9Y5E3 794 aa24.53■■□□□ 1.52
SYNGR3-206ENST00000618464 NT5C1B-RDH14C9J2C7 533 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 INO80B-WBP1J3KQ70 363 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 PER2O15055 1255 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 XRCC6P12956 609 aaKnown RBP eCLIP24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 ALADP13716 330 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 GLRA2P23416 452 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 NDUFV1P49821 464 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 PLCB3Q01970 1234 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 PLPP4Q5VZY2 271 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 NACC1Q96RE7 527 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 PUF60Q9UHX1 559 aaKnown RBP24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 C5orf42Q9H799 3197 aa24.52■■□□□ 1.52
SYNGR3-206ENST00000618464 TSPAN1O60635 241 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 ZNF623O75123 536 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 ZC3H11AO75152 810 aaKnown RBP eCLIP24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 RPA1P27694 616 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 GJB2P29033 226 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 PPM1AP35813 382 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 BCAR1P56945 870 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 NOMO2Q5JPE7 1267 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms