RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 GOLGA8HP0CJ92 632 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 DLATP10515 647 aaKnown RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 KRT17Q04695 432 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 NCAPHQ15003 741 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 TRIP13Q15645 432 aaPredicted RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 KYNUQ16719 465 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 TAF1BQ53T94 588 aaPredicted RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 ACBD5Q5T8D3 534 aaPredicted RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 SETD3Q86TU7 594 aaPredicted RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 CENPTQ96BT3 561 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 PIGSQ96S52 555 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 STK33Q9BYT3 514 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 CARD9Q9H257 536 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 TFCP2L1Q9NZI6 479 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 DLGAP2Q9P1A6 1054 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 AFG3L2Q9Y4W6 797 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 USP32Q8NFA0 1604 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 LDHAP00338 332 aaKnown RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 KRT19P08727 400 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 SCYL2Q6P3W7 929 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 DHX38Q92620 1227 aaKnown RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 USP6NLQ92738 828 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 INTS2Q9H0H0 1204 aaKnown RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 PAPOLBQ9NRJ5 636 aaKnown RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 CEP152O94986 1710 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 IGKV5-2P06315 115 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 BTDP43251 543 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 DSG1Q02413 1049 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 LAMB3Q13751 1172 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 RASGRF1Q13972 1273 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 SLFN12LQ6IEE8 588 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 LCA5Q86VQ0 697 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 NUDCD3Q8IVD9 361 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 ANKS1AQ92625 1134 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 NUP85Q9BW27 656 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 SPC25Q9HBM1 224 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 USP31Q70CQ4 1352 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 GNGT2O14610 69 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 ATP5BP06576 529 aaKnown RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 CDC25AP30304 524 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 MCAMP43121 646 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 ICA1Q05084 483 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 C16orf89Q6UX73 402 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 JAMLQ86YT9 394 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 MAGEC3Q8TD91 643 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 AENQ8WTP8 325 aaKnown RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 HPS3Q969F9 1004 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 HDAC11Q96DB2 347 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 ERP27Q96DN0 273 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 MAP3K14Q99558 947 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 MRPL46Q9H2W6 279 aaKnown RBP10.93□□□□□ -0.66
CUL4A-212ENST00000617546 KIF9Q9HAQ2 790 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 C15orf41Q9Y2V0 281 aa10.93□□□□□ -0.66
CUL4A-212ENST00000617546 ARHGEF9O43307 516 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 SH3BP5O60239 455 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 KRT7P08729 469 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 MYCLP12524 364 aaPredicted RBP10.92□□□□□ -0.66
CUL4A-212ENST00000617546 GYG1P46976 350 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 LRRC14Q15048 493 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 BSPRYQ5W0U4 402 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 KLC3Q6P597 504 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 ZNF662Q6ZS27 426 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 TSSK1BQ9BXA7 367 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 OSBPL8Q9BZF1 889 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 UTYO14607 1347 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 A0A0A6YYK5 440 aaPredicted RBP10.92□□□□□ -0.66
CUL4A-212ENST00000617546 SERPINB9P50453 376 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 DRAP1Q14919 205 aaPredicted RBP10.92□□□□□ -0.66
CUL4A-212ENST00000617546 CNGA3Q16281 694 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 SLC44A4Q53GD3 710 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 CDKAL1Q5VV42 579 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 SLC26A7Q8TE54 656 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 ATXN2LQ8WWM7 1075 aaKnown RBP10.92□□□□□ -0.66
CUL4A-212ENST00000617546 ANKRD36BP1Q96IX9 119 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 MTRQ99707 1265 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 RXFP1Q9HBX9 757 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 A1CFQ9NQ94 594 aaKnown RBP10.92□□□□□ -0.66
CUL4A-212ENST00000617546 TMEM120BA0PK00 339 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 ABLIM1O14639 778 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 ZBED1O96006 694 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 CASKIN2Q8WXE0 1202 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 CFAP36Q96G28 342 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 AGPAT1Q99943 283 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 GJB4Q9NTQ9 266 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 ETAA1Q9NY74 926 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 TRPC5Q9UL62 973 aaPredicted RBP10.92□□□□□ -0.66
CUL4A-212ENST00000617546 ZNF18P17022 549 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 NLRP11P59045 1033 aaKnown RBP10.92□□□□□ -0.66
CUL4A-212ENST00000617546 ERVK-24P63145 666 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 IFRD2Q12894 506 aaPredicted RBP10.92□□□□□ -0.66
CUL4A-212ENST00000617546 FAF2Q96CS3 445 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 ZNF577Q9BSK1 485 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 KMT5AQ9NQR1 393 aa10.92□□□□□ -0.66
CUL4A-212ENST00000617546 PRKAB2O43741 272 aa10.91□□□□□ -0.66
CUL4A-212ENST00000617546 CTDNEP1O95476 244 aa10.91□□□□□ -0.66
CUL4A-212ENST00000617546 ARL4AP40617 200 aa10.91□□□□□ -0.66
CUL4A-212ENST00000617546 TXNRD1Q16881 649 aa10.91□□□□□ -0.66
CUL4A-212ENST00000617546 NT5DC1Q5TFE4 455 aa10.91□□□□□ -0.66
CUL4A-212ENST00000617546 TMC4Q7Z404 712 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms