RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 NR1H4Q96RI1 486 aaPredicted RBP10.48□□□□□ -0.73
SHTN1-207ENST00000615301 CCT8L2Q96SF2 557 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 LMTK3Q96Q04 1460 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 CCDC78A2IDD5 438 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 NEMP1O14524 444 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 PPEF1O14829 653 aaPredicted RBP10.48□□□□□ -0.73
SHTN1-207ENST00000615301 RAD17O75943 681 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 CHN1P15882 459 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 DYNC1I2Q13409 638 aaKnown RBP10.48□□□□□ -0.73
SHTN1-207ENST00000615301 KIAA2013Q8IYS2 634 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 SNX19Q92543 992 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 RAD54LQ92698 747 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 FAM118BQ9BPY3 351 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 SLC12A6Q9UHW9 1150 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 ABCC10Q5T3U5 1492 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 E2F8A0AVK6 867 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 KPNA7A9QM74 516 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 KRT17Q04695 432 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 EFTUD2Q15029 972 aaKnown RBP eCLIP10.48□□□□□ -0.73
SHTN1-207ENST00000615301 LMBRD2Q68DH5 695 aaPredicted RBP10.48□□□□□ -0.73
SHTN1-207ENST00000615301 KDELC2Q7Z4H8 507 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 C4orf33Q8N1A6 199 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 ZCWPW1Q9H0M4 648 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 EHD2Q9NZN4 543 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 CCND2P30279 289 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 MDH1P40925 334 aaKnown RBP10.48□□□□□ -0.73
SHTN1-207ENST00000615301 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
SHTN1-207ENST00000615301 FSD1LQ9BXM9 530 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 INTS2Q9H0H0 1204 aaKnown RBP10.48□□□□□ -0.73
SHTN1-207ENST00000615301 SLC5A4Q9NY91 659 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 PNMA2Q9UL42 364 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 ARHGAP26Q9UNA1 814 aa10.48□□□□□ -0.73
SHTN1-207ENST00000615301 TBC1D9BQ66K14 1250 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 OLFML2BQ68BL8 750 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 NLRP10Q86W26 655 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 RFWD2Q8NHY2 731 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 SH3RF3Q8TEJ3 882 aaPredicted RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 NPHS2Q9NP85 383 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 FAM8A1Q9UBU6 413 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 PIK3R2O00459 728 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 KDM1AO60341 852 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 SNX2O60749 519 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 DRP2Q13474 957 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 TMEM35BQ8NCS4 154 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 ZSCAN9O15535 394 aaPredicted RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 ESRRBO95718 433 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 PSAPP07602 524 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 STAG2Q8N3U4 1231 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 XXYLT1Q8NBI6 393 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 DHX38Q92620 1227 aaKnown RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 FAM81BQ96LP2 452 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 DIS3Q9Y2L1 958 aaKnown RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 CCZ1BP86790 482 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 CCZ1P86791 482 aaPredicted RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 DSTYKQ6XUX3 929 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 SYNE4Q8N205 404 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 RNPC3Q96LT9 517 aaKnown RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 ADNPQ9H2P0 1102 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 KIF17Q9P2E2 1029 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 PCDHA6Q9UN73 950 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 PCDHA8Q9Y5H6 950 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 CHRNA3P32297 505 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 FASTKD1Q53R41 847 aaKnown RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 PADI6Q6TGC4 694 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 DDIASQ8IXT1 998 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 C9orf72Q96LT7 481 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 KLF6Q99612 283 aaPredicted RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 CXorf56Q9H5V9 222 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 COG4Q9H9E3 785 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 TFR2Q9UP52 801 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 UBE4BO95155 1302 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 TYK2P29597 1187 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 NFX1Q12986 1120 aaKnown RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 RHPN2Q8IUC4 686 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 SNF8Q96H20 258 aa10.47□□□□□ -0.73
SHTN1-207ENST00000615301 ASCC2Q9H1I8 757 aaPredicted RBP10.47□□□□□ -0.73
SHTN1-207ENST00000615301 CFAP73A6NFT4 308 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 UBTFL6P0CB48 400 aaPredicted RBP10.46□□□□□ -0.73
SHTN1-207ENST00000615301 PRDX5P30044 214 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 MRPS15P82914 257 aaKnown RBP10.46□□□□□ -0.73
SHTN1-207ENST00000615301 SKOR1P84550 965 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 FMR1Q06787 632 aaKnown RBP eCLIP10.46□□□□□ -0.73
SHTN1-207ENST00000615301 AP1B1Q10567 949 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 ARL13BQ3SXY8 428 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 BPIFA3Q9BQP9 254 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 AFF4Q9UHB7 1163 aaKnown RBP10.46□□□□□ -0.73
SHTN1-207ENST00000615301 M0QYV0 167 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 GUCY1A2P33402 732 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 ARSEP51690 589 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 NEK2P51955 445 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 NR1H3Q13133 447 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 METTL16Q86W50 562 aaKnown RBP10.46□□□□□ -0.73
SHTN1-207ENST00000615301 TAGAPQ8N103 731 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 NAF1Q96HR8 494 aaKnown RBP10.46□□□□□ -0.73
SHTN1-207ENST00000615301 TMEM47Q9BQJ4 181 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 KIFC3Q9BVG8 833 aa10.46□□□□□ -0.73
SHTN1-207ENST00000615301 ARHGAP10A1A4S6 786 aa10.46□□□□□ -0.74
SHTN1-207ENST00000615301 USP17L10C9JJH3 530 aa10.46□□□□□ -0.74
SHTN1-207ENST00000615301 TDP2O95551 362 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms