RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 COL4A3BPQ9Y5P4 624 aa13.58□□□□□ -0.24
PDLIM2-218ENST00000614502 HOXB8P17481 243 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 FGFR4P22455 802 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 YWHABP31946 246 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 ERVFC1P60507 584 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 SMC1AQ14683 1233 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 CLLU1OSQ5K130 101 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 PLPP4Q5VZY2 271 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 NCAPH2Q6IBW4 605 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 GLB1LQ6UWU2 654 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 LRRC55Q6ZSA7 311 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 HELQQ8TDG4 1101 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 CASP10Q92851 521 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 GTF3C6Q969F1 213 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 TMEM169Q96HH4 297 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 PHOX2BQ99453 314 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 SH2D3AQ9BRG2 576 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 LXNQ9BS40 222 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 FAM105AQ9NUU6 356 aa13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 USP15Q9Y4E8 981 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-218ENST00000614502 CACNA1HO95180 2353 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 LOC730098B7Z3J9 87 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 CTDNEP1O95476 244 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 MXD4Q14582 209 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 XKR9Q5GH70 373 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 IER5LQ5T953 404 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 PLA2G4FQ68DD2 849 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 TMEM87AQ8NBN3 555 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 CNNM3Q8NE01 707 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 URGCPQ8TCY9 931 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 OXER1Q8TDS5 423 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 EDAQ92838 391 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 HAS1Q92839 578 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 CCDC43Q96MW1 224 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 MTRQ99707 1265 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 PHF7Q9BWX1 381 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 KCNH6Q9H252 994 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 IFT122Q9HBG6 1241 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 AGPAT5Q9NUQ2 364 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 KANSL3Q9P2N6 904 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 PCDHA12Q9UN75 941 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 CNTNAP2Q9UHC6 1331 aa13.56□□□□□ -0.24
PDLIM2-218ENST00000614502 TDRD15B5MCY1 1934 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 CSDE1O75534 798 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 AXLP30530 894 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 NEK4P51957 841 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 NPEPPSP55786 919 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 BCAR1P56945 870 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 RNASELQ05823 741 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 TFDP1Q14186 410 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 CALCRLQ16602 461 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 ME3Q16798 604 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 ANKRD54Q6NXT1 300 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 DYDC2Q96IM9 177 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 KIF2CQ99661 725 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 UBN1Q9NPG3 1134 aa13.55□□□□□ -0.24
PDLIM2-218ENST00000614502 USP34Q70CQ2 3546 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 TMEM221A6NGB7 291 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 M0R296 226 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 NEMFO60524 1076 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 ZC3H11AO75152 810 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 ERLIN2O94905 339 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 LYPLA2O95372 231 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 FDPSP14324 419 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 TECP42680 631 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 POU5F1BQ06416 359 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 LAMTOR4Q0VGL1 99 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 NR5A1Q13285 461 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 KCNC3Q14003 757 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 CBX2Q14781 532 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 EMC2Q15006 297 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 SAFBQ15424 915 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 TRIM67Q6ZTA4 783 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 FERMT3Q86UX7 667 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 KSR1Q8IVT5 923 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 TPH2Q8IWU9 490 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 MRPL43Q8N983 215 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 NSUN7Q8NE18 718 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 PRPF31Q8WWY3 499 aaKnown RBP13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 TNFRSF25Q93038 417 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 RPGRIP1Q96KN7 1286 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 MFSD14AQ96MC6 490 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 FAM193BQ96PV7 902 aaPredicted RBP13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 GJB4Q9NTQ9 266 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 ANKEF1Q9NU02 776 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 PCDHB2Q9Y5E7 798 aa13.54□□□□□ -0.24
PDLIM2-218ENST00000614502 OFD1O75665 1012 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 DGAT1O75907 488 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 SLITRK3O94933 977 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 SRGAP2CP0DJJ0 459 aa13.53□□□□□ -0.24
PDLIM2-218ENST00000614502 XRCC6P12956 609 aaKnown RBP eCLIP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms