RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 OPLAHO14841 1288 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 SERPING1P05155 500 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 OSBPP22059 807 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 TMOD1P28289 359 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 NOGQ13253 232 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 HGSNATQ68CP4 663 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 ANKRD23Q86SG2 305 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 ACTRT1Q8TDG2 376 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 NSMCE1Q8WV22 266 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 XPO6Q96QU8 1125 aaKnown RBP23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 CNOT8Q9UFF9 292 aaKnown RBP23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 BAIAP2L1Q9UHR4 511 aa23.77■■□□□ 1.4
POLR2J3-220ENST00000613744 CCDC188H7C350 402 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 VWA5AO00534 786 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 PLA2G6O60733 806 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 PPP1R11O60927 126 aaPredicted RBP23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 ALADP13716 330 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 HSPA6P17066 643 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 AMPD3Q01432 767 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 GFPT1Q06210 699 aaPredicted RBP23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 PPP1R7Q15435 360 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 USH1GQ495M9 461 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 IFNL1Q8IU54 200 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 ZNF483Q8TF39 744 aaPredicted RBP23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 TLCD1Q96CP7 247 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 SPAG5Q96R06 1193 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 TRIM9Q9C026 710 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 MMRN2Q9H8L6 949 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 FAM207AQ9NSI2 230 aaPredicted RBP23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 HOXC10Q9NYD6 342 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 NOVA2Q9UNW9 492 aaKnown RBP23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 PARP14Q460N5 1801 aa23.76■■□□□ 1.39
POLR2J3-220ENST00000613744 EPHB6O15197 1021 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 CCNHP51946 323 aaPredicted RBP23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 PABPC4Q13310 644 aaKnown RBP eCLIP23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 ZNF268Q14587 947 aaPredicted RBP23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 COA7Q96BR5 231 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 RAVER2Q9HCJ3 691 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 BARHL2Q9NY43 387 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 NOP53Q9NZM5 478 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 TRPC6Q9Y210 931 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 CTDP1Q9Y5B0 961 aaPredicted RBP23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 ANKRD33BA6NCL7 494 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 ZBTB5O15062 677 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 RPSAP08865 295 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 NAPAP54920 295 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 PLS1Q14651 629 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 TCP11Q8WWU5 503 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 AGBL1Q96MI9 1066 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 ANKRD27Q96NW4 1050 aa23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 RANBP17Q9H2T7 1088 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-220ENST00000613744 PNMA6FA0A0J9YX94 578 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 STXBP3O00186 592 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 GCKP35557 465 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 SREBF2Q12772 1141 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 BLIDQ8IZY5 108 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 ANKRD13CQ8N6S4 541 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 CEP72Q9P209 647 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 ACCSLQ4AC99 568 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 PIGWQ7Z7B1 504 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 LMBR1Q8WVP7 490 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 SLC38A10Q9HBR0 1119 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 SMCHD1A6NHR9 2005 aa23.74■■□□□ 1.39
POLR2J3-220ENST00000613744 COL11A1P12107 1806 aaPredicted RBP23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 ZBED4O75132 1171 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 IBSPP21815 317 aaPredicted RBP23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 MAP2K1Q02750 393 aaPredicted RBP23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 STK4Q13043 487 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 TMEM132BQ14DG7 1078 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 IFI16Q16666 785 aaKnown RBP23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 C10orf76Q5T2E6 689 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 BZW1Q7L1Q6 419 aaKnown RBP23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 HOOK3Q86VS8 718 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 SEC14L1Q92503 715 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 STAMBPL1Q96FJ0 436 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 SLITRK6Q9H5Y7 841 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 TXNRD2Q9NNW7 524 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 BTBD7Q9P203 1132 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 FBXL5Q9UKA1 691 aa23.73■■□□□ 1.39
POLR2J3-220ENST00000613744 INHBEP58166 350 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 MAGOHP61326 146 aaKnown RBP23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 ADCY2Q08462 1091 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 MYO1EQ12965 1108 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 TRADDQ15628 312 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 MAGOHBQ96A72 148 aaKnown RBP23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 SAAL1Q96ER3 474 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 ZNF317Q96PQ6 595 aaPredicted RBP23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 PNMA3Q9UL41 463 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 CORO1CQ9ULV4 474 aaPredicted RBP23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 ADAMTS5Q9UNA0 930 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 ZNF536O15090 1300 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 GOLGA6L10A0A0M3HER8 536 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 ANP32DO95626 131 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 FTCDO95954 541 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 TM4SF4P48230 202 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 LRRC63Q05C16 580 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 RPS6KA1Q15418 735 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 TAF1CQ15572 869 aaPredicted RBP23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 SFMBT2Q5VUG0 894 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 KLHL7Q8IXQ5 586 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms