RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CCDC113Q9H0I3 377 aa16.33■□□□□ 0.21
PCDHGB1-202ENST00000611598 VEZTQ9HBM0 779 aa16.33■□□□□ 0.21
PCDHGB1-202ENST00000611598 DBR1Q9UK59 544 aaKnown RBP16.33■□□□□ 0.21
PCDHGB1-202ENST00000611598 RABGAP1Q9Y3P9 1069 aa16.33■□□□□ 0.21
PCDHGB1-202ENST00000611598 CD2APQ9Y5K6 639 aa16.33■□□□□ 0.21
PCDHGB1-202ENST00000611598 NRAPQ86VF7 1730 aa16.33■□□□□ 0.21
PCDHGB1-202ENST00000611598 FRMPD4Q14CM0 1322 aa16.33■□□□□ 0.21
PCDHGB1-202ENST00000611598 FOCADQ5VW36 1801 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 TCRBV7S2A1N4TA0A589 114 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 MSH4O15457 936 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 PHF2O75151 1096 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 RPSAP08865 295 aaKnown RBP16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 CLTAP09496 248 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 USH1GQ495M9 461 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 RC3H1Q5TC82 1133 aaKnown RBP16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 RINT1Q6NUQ1 792 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 MYCT1Q8N699 235 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 CCDC63Q8NA47 563 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 RPGRQ92834 1020 aaKnown RBP16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 EIF2AK1Q9BQI3 630 aaKnown RBP16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 VAV3Q9UKW4 847 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 PCDHA3Q9Y5H8 950 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 ATP2B4P23634 1241 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 SLC8A1P32418 973 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 CTTNQ14247 550 aaKnown RBP16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 ITIH4Q14624 930 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 PHLDB3Q6NSJ2 640 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 TRPM8Q7Z2W7 1104 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 PNMA8AQ86V59 439 aaPredicted RBP16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 TAX1BP1Q86VP1 789 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 CPNE8Q86YQ8 564 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 USP40Q9NVE5 1235 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 SAMD15Q9P1V8 674 aa16.33■□□□□ 0.2
PCDHGB1-202ENST00000611598 ANKRD62A6NC57 917 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 FOXN3O00409 490 aaPredicted RBP16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 HSPA1LP34931 641 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 DRG2P55039 364 aaKnown RBP16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 LRRC14Q15048 493 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 PPP2R5EQ16537 467 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 FAM98CQ17RN3 349 aaKnown RBP16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 Q4G0T1 1027 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 TLDC1Q6P9B6 456 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 MOXD1Q6UVY6 613 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 OLFML3Q9NRN5 406 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 RASAL2Q9UJF2 1139 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 PTPN22Q9Y2R2 807 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 CEP83Q9Y592 693 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 EYA4O95677 639 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 AGTP01019 485 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 HOXA13P31271 388 aaPredicted RBP16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 ZNF746Q6NUN9 644 aaPredicted RBP16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 BARGINQ6ZT62 677 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 RDH13Q8NBN7 331 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 MIEF2Q96C03 454 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 STAMBPL1Q96FJ0 436 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 ATP6V0A4Q9HBG4 840 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 CTTNBP2NLQ9P2B4 639 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 APEX2Q9UBZ4 518 aa16.32■□□□□ 0.2
PCDHGB1-202ENST00000611598 ZNF831Q5JPB2 1677 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 RIPK2O43353 540 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 FAM13AO94988 1023 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 SCNN1DP51172 638 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 ADCY2Q08462 1091 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 AP3B2Q13367 1082 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 AUHQ13825 339 aaKnown RBP16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 CNGA2Q16280 664 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 C6orf118Q5T5N4 469 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 CCDC137Q6PK04 289 aaKnown RBP16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 TBC1D16Q8TBP0 767 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 MGARPQ8TDB4 240 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 TBC1D22AQ8WUA7 517 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 GLT8D2Q9H1C3 349 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 L3MBTL1Q9Y468 752 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 C6orf229H3BNL8 230 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 TBX3O15119 743 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 ATMINO43313 823 aaPredicted RBP16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 GSTA1P08263 222 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 CREB1P16220 341 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 KCNJ1P48048 391 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 KCNJ2P63252 427 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 MYL7Q01449 175 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 LLGL1Q15334 1064 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 NBPF9Q3BBW0 867 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 OTUD6AQ7L8S5 288 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 CCDC25Q86WR0 208 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 CERS5Q8N5B7 392 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 DNAJC18Q9H819 358 aa16.31■□□□□ 0.2
PCDHGB1-202ENST00000611598 AFF2P51816 1311 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 SYNGAP1Q96PV0 1343 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 FOXO6A8MYZ6 492 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 RASGRF2O14827 1237 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 UBOX5O94941 541 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 FTLP02792 175 aaPredicted RBP16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 CHRNA3P32297 505 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 PSEN1P49768 467 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 NFIAQ12857 509 aa16.3■□□□□ 0.2
PCDHGB1-202ENST00000611598 PRR5LQ6MZQ0 368 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms