RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 DRAP1Q14919 205 aaPredicted RBP12.99□□□□□ -0.33
USP6NL-206ENST00000609853 CFAP221Q4G0U5 840 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 CBWD6Q4V339 395 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 CBWD3Q5JTY5 395 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 CBWD5Q5RIA9 395 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 ABHD15Q6UXT9 468 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 LBX2Q6XYB7 198 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.99□□□□□ -0.33
USP6NL-206ENST00000609853 H2AFVQ71UI9 128 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 ANKRD13CQ8N6S4 541 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 TMEM161BQ8NDZ6 487 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 DCPSQ96C86 337 aaKnown RBP12.99□□□□□ -0.33
USP6NL-206ENST00000609853 IKZF4Q9H2S9 585 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 PDLIM7Q9NR12 457 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 L1RE1Q9UN81 338 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 SLC16A4O15374 487 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 BUB1O43683 1085 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 EVI5O60447 810 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 PALMO75781 387 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 SEC31AO94979 1220 aaKnown RBP12.99□□□□□ -0.33
USP6NL-206ENST00000609853 NPTX2P47972 431 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 ACTR2P61160 394 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 VSNL1P62760 191 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 VGLL4Q14135 290 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 PLS1Q14651 629 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 GLE1Q53GS7 698 aaKnown RBP12.99□□□□□ -0.33
USP6NL-206ENST00000609853 MEI1Q5TIA1 1274 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 RIOX2Q8IUF8 465 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 SULF1Q8IWU6 871 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 PROCA1Q8NCQ7 364 aaPredicted RBP12.99□□□□□ -0.33
USP6NL-206ENST00000609853 LMO3Q8TAP4 145 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 UBXN6Q9BZV1 441 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 KMT5AQ9NQR1 393 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 PAPPA2Q9BXP8 1791 aa12.99□□□□□ -0.33
USP6NL-206ENST00000609853 LCTP09848 1927 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 EMSYQ7Z589 1322 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 IGSF9BQ9UPX0 1349 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 CCDC169A6NNP5 214 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 PDE2AO00408 941 aaPredicted RBP12.98□□□□□ -0.33
USP6NL-206ENST00000609853 ZNF185O15231 689 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 STBD1O95210 358 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 ATG7O95352 703 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 SUPT20HL2P0C7V6 817 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 TRIM49P0CI25 452 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 TRIM49CP0CI26 452 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 GTF2H1P32780 548 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 PLA2G4AP47712 749 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
USP6NL-206ENST00000609853 KIF22Q14807 665 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 ENOX2Q16206 610 aaKnown RBP12.98□□□□□ -0.33
USP6NL-206ENST00000609853 BRDTQ58F21 947 aaPredicted RBP12.98□□□□□ -0.33
USP6NL-206ENST00000609853 PLA2G4FQ68DD2 849 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 SWSAP1Q6NVH7 229 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 ANKRD35Q8N283 1001 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 SPATA4Q8NEY3 305 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 SLC30A5Q8TAD4 765 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 TMC2Q8TDI7 906 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 IFT74Q96LB3 600 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 CBWD1Q9BRT8 395 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 ACBD3Q9H3P7 528 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 ATP6V0A4Q9HBG4 840 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 ABCB6Q9NP58 842 aa12.98□□□□□ -0.33
USP6NL-206ENST00000609853 DENND3A2RUS2 1198 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 CXCL11O14625 94 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 KIAA0391O15091 583 aaKnown RBP12.97□□□□□ -0.33
USP6NL-206ENST00000609853 ZNF862O60290 1169 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 GARTP22102 1010 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 CNGA1P29973 690 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 COPB2P35606 906 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 PPATQ06203 517 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 EPC2Q52LR7 807 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 NFRKBQ6P4R8 1299 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 RDH13Q8NBN7 331 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 COG1Q8WTW3 980 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 TAF4BQ92750 862 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 FBXL18Q96ME1 805 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 MPHOSPH6Q99547 160 aaKnown RBP12.97□□□□□ -0.33
USP6NL-206ENST00000609853 SYT11Q9BT88 431 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 PCIF1Q9H4Z3 704 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 VIPAS39Q9H9C1 493 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 GPRC5CQ9NQ84 441 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 CYP26B1Q9NR63 512 aa12.97□□□□□ -0.33
USP6NL-206ENST00000609853 AJAP1Q9UKB5 411 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-206ENST00000609853 DDX3XO00571 662 aaKnown RBP eCLIP12.96□□□□□ -0.33
USP6NL-206ENST00000609853 SASH3O75995 380 aa12.96□□□□□ -0.33
USP6NL-206ENST00000609853 TGFB3P10600 412 aa12.96□□□□□ -0.33
USP6NL-206ENST00000609853 MXI1P50539 228 aa12.96□□□□□ -0.33
USP6NL-206ENST00000609853 PRKCEQ02156 737 aa12.96□□□□□ -0.33
USP6NL-206ENST00000609853 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
USP6NL-206ENST00000609853 SNRNP35Q16560 246 aaKnown RBP12.96□□□□□ -0.33
USP6NL-206ENST00000609853 GJB7Q6PEY0 223 aa12.96□□□□□ -0.33
USP6NL-206ENST00000609853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.33
USP6NL-206ENST00000609853 GPIHBP1Q8IV16 184 aa12.96□□□□□ -0.33
USP6NL-206ENST00000609853 PBKQ96KB5 322 aa12.96□□□□□ -0.33
USP6NL-206ENST00000609853 FAM81BQ96LP2 452 aa12.96□□□□□ -0.33
USP6NL-206ENST00000609853 PACSIN1Q9BY11 444 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms