RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CARSP49589 748 aaKnown RBP13.9□□□□□ -0.18
USP6NL-205ENST00000609104 PDIA2Q13087 525 aaKnown RBP13.9□□□□□ -0.18
USP6NL-205ENST00000609104 CCDC137Q6PK04 289 aaKnown RBP13.9□□□□□ -0.18
USP6NL-205ENST00000609104 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
USP6NL-205ENST00000609104 MRPS15P82914 257 aaKnown RBP13.9□□□□□ -0.18
USP6NL-205ENST00000609104 DYNC1I2Q13409 638 aaKnown RBP13.9□□□□□ -0.18
USP6NL-205ENST00000609104 NCAPHQ15003 741 aa13.9□□□□□ -0.18
USP6NL-205ENST00000609104 RARS2Q5T160 578 aaKnown RBP13.9□□□□□ -0.18
USP6NL-205ENST00000609104 TCP11X1B4DZS4 312 aa13.9□□□□□ -0.18
USP6NL-205ENST00000609104 GNA15P30679 374 aa13.9□□□□□ -0.18
USP6NL-205ENST00000609104 CNGA3Q16281 694 aa13.9□□□□□ -0.18
USP6NL-205ENST00000609104 PAWRQ96IZ0 340 aaKnown RBP13.9□□□□□ -0.18
USP6NL-205ENST00000609104 ARHGAP26Q9UNA1 814 aa13.9□□□□□ -0.18
USP6NL-205ENST00000609104 ZNF212Q9UDV6 495 aa13.9□□□□□ -0.19
USP6NL-205ENST00000609104 NFKBIAP25963 317 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ERFP50548 548 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 NR3C1P04150 777 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 MTMR1Q13613 665 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ZNF746Q6NUN9 644 aaPredicted RBP13.89□□□□□ -0.19
USP6NL-205ENST00000609104 FLAD1Q8NFF5 587 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 AFG1LQ8WV93 481 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 POLD4Q9HCU8 107 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ARHGAP10A1A4S6 786 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 PIK3R2O00459 728 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 NFX1Q12986 1120 aaKnown RBP13.89□□□□□ -0.19
USP6NL-205ENST00000609104 PTK2BQ14289 1009 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
USP6NL-205ENST00000609104 OR9Q1Q8NGQ5 310 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ZNF341Q9BYN7 854 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ZCCHC17Q9NP64 241 aaKnown RBP13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ESYT3A0FGR9 886 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 SERPINI2O75830 405 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 VCAM1P19320 739 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 CYTH1Q15438 398 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 KLC4Q9NSK0 619 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ATG3Q9NT62 314 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 MYL3P08590 195 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 CUL3Q13618 768 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 FAM96AQ9H5X1 160 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 GPC3P51654 580 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 VAMP7P51809 220 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ALDH18A1P54886 795 aaKnown RBP13.89□□□□□ -0.19
USP6NL-205ENST00000609104 PATL1Q86TB9 770 aaKnown RBP13.89□□□□□ -0.19
USP6NL-205ENST00000609104 PROM2Q8N271 834 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 PLEKHF1Q96S99 279 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 EGFL8Q99944 293 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 MAGEB5Q9BZ81 275 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ROR1Q01973 937 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ZFYVE19Q96K21 471 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.195e-7■■□□□ 13.2
USP6NL-205ENST00000609104 GOLPH3LQ9H4A5 285 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ALG13Q9NP73 1137 aaKnown RBP13.89□□□□□ -0.19
USP6NL-205ENST00000609104 CALB1P05937 261 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 TJAP1Q5JTD0 557 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 ZBED8Q8IZ13 594 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 SNF8Q96H20 258 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 CASS4Q9NQ75 786 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 NDFIP2Q9NV92 336 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 POTEMA6NI47 508 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 FASTKD1Q53R41 847 aaKnown RBP13.89□□□□□ -0.19
USP6NL-205ENST00000609104 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 CALR3Q96L12 384 aaKnown RBP13.89□□□□□ -0.19
USP6NL-205ENST00000609104 RUBCNLQ9H714 662 aa13.89□□□□□ -0.19
USP6NL-205ENST00000609104 CFAP73A6NFT4 308 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 ENO1P06733 434 aaKnown RBP13.88□□□□□ -0.19
USP6NL-205ENST00000609104 ZNF568Q3ZCX4 644 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 MARCH10Q8NA82 808 aaPredicted RBP13.88□□□□□ -0.19
USP6NL-205ENST00000609104 TMEM35BQ8NCS4 154 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 MS4A14Q96JA4 679 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 PRAMEF22A3QJZ6 481 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 RASSF10A6NK89 507 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 MRPL28Q13084 256 aaKnown RBP13.88□□□□□ -0.19
USP6NL-205ENST00000609104 MIF4GDA9UHW6 222 aaKnown RBP13.88□□□□□ -0.19
USP6NL-205ENST00000609104 HEATR6Q6AI08 1181 aaKnown RBP13.88□□□□□ -0.19
USP6NL-205ENST00000609104 OLFM3Q96PB7 478 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 EML4Q9HC35 981 aaKnown RBP13.88□□□□□ -0.19
USP6NL-205ENST00000609104 IP6K2Q9UHH9 426 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 LZTS1Q9Y250 596 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 WDR62O43379 1518 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 E9PMD0 336 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 UBE3AQ05086 875 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 ADNPQ9H2P0 1102 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 IL10P22301 178 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 FGFR4P22455 802 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
USP6NL-205ENST00000609104 WNT8AQ9H1J5 351 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 GOLGA8RI6L899 631 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 PRPF4O43172 522 aaKnown RBP eCLIP13.88□□□□□ -0.19
USP6NL-205ENST00000609104 RECQLP46063 649 aaPredicted RBP13.88□□□□□ -0.19
USP6NL-205ENST00000609104 SKOR1P84550 965 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 TMCO5AQ8N6Q1 288 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 MAFGO15525 162 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 APOA1P02647 267 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 LRRC36Q1X8D7 754 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 SLFNL1Q499Z3 407 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 C1orf54Q8WWF1 131 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 SH3GLB2Q9NR46 395 aa13.88□□□□□ -0.19
USP6NL-205ENST00000609104 ARMC2Q8NEN0 867 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms