RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 NKX2-4Q9H2Z4 354 aa13.5□□□□□ -0.25
LINC00963-212ENST00000608669 PPME1Q9Y570 386 aa13.5□□□□□ -0.25
LINC00963-212ENST00000608669 MORC2Q9Y6X9 1032 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-212ENST00000608669 ENPP3O14638 875 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 GAS2O43903 313 aaKnown RBP13.49□□□□□ -0.25
LINC00963-212ENST00000608669 TSPAN1O60635 241 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 FAM13AO94988 1023 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 CSPG5O95196 566 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 FGFR1P11362 822 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 IDEP14735 1019 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 NPTX2P47972 431 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 TFDP1Q14186 410 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 CCDC73Q6ZRK6 1079 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 TAS1R3Q7RTX0 852 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 SFR1Q86XK3 245 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 DDX12PQ92771 950 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 APOL6Q9BWW8 343 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 EIF2AQ9BY44 585 aaKnown RBP13.49□□□□□ -0.25
LINC00963-212ENST00000608669 SCAND2PQ9GZW5 306 aaPredicted RBP13.49□□□□□ -0.25
LINC00963-212ENST00000608669 FAM13BQ9NYF5 915 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 STK17AQ9UEE5 414 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 MTUS1Q9ULD2 1270 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
LINC00963-212ENST00000608669 COL4A4P53420 1690 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 ABHD14A-ACY1A0A1B0GW23 586 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 K7ENM7 598 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 GPR182O15218 404 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 ACTN4O43707 911 aaKnown RBP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 TBCAO75347 108 aaKnown RBP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 BAIAP3O94812 1187 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 ERLIN2O94905 339 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 PARNO95453 639 aaKnown RBP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 AMHP03971 560 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 PRKCBP05771 671 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 SFPQP23246 707 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 GUCY2CP25092 1073 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 NMT1P30419 496 aaKnown RBP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 DSC3Q14574 896 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 MXD4Q14582 209 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 AMHR2Q16671 573 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 EEF1DP3Q658K8 133 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 ADALQ6DHV7 355 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 TWF2Q6IBS0 349 aaKnown RBP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 SV2BQ7L1I2 683 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 HERC6Q8IVU3 1022 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 MYCT1Q8N699 235 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 GLIS3Q8NEA6 775 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 KIFAP3Q92845 792 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 ERCC4Q92889 916 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-212ENST00000608669 IFT74Q96LB3 600 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 ZBED2Q9BTP6 218 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 KMT5AQ9NQR1 393 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 HES2Q9Y543 173 aa13.48□□□□□ -0.25
LINC00963-212ENST00000608669 TISP43B9A030 160 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 RPLP2P05387 115 aaKnown RBP13.47□□□□□ -0.25
LINC00963-212ENST00000608669 CA3P07451 260 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 HARSP12081 509 aaKnown RBP13.47□□□□□ -0.25
LINC00963-212ENST00000608669 ARF4P18085 180 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-212ENST00000608669 DNAJB2P25686 324 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 NAMPTP43490 491 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 FXR1P51114 621 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC00963-212ENST00000608669 DMP1Q13316 513 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-212ENST00000608669 CUL4BQ13620 913 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 ZC2HC1CQ53FD0 456 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-212ENST00000608669 ODR4Q5SWX8 454 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 CDCA2Q69YH5 1023 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-212ENST00000608669 ZBTB8OSQ8IWT0 167 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 EXOC8Q8IYI6 725 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 APBB2Q92870 758 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 DNAJC19Q96DA6 116 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 DRC1Q96MC2 740 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 CCDC113Q9H0I3 377 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 TSPYL2Q9H2G4 693 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-212ENST00000608669 MTIF3Q9H2K0 278 aaKnown RBP13.47□□□□□ -0.25
LINC00963-212ENST00000608669 AGPAT5Q9NUQ2 364 aa13.47□□□□□ -0.25
LINC00963-212ENST00000608669 FNDC1Q4ZHG4 1894 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-212ENST00000608669 TLL1O43897 1013 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 NPTXRO95502 500 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 PLS3P13797 630 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 ZSCAN20P17040 1043 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-212ENST00000608669 ATF7P17544 494 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-212ENST00000608669 CMA1P23946 247 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 HOXA11P31270 313 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-212ENST00000608669 SYKP43405 635 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 CASP5P51878 434 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 ASIC1P78348 528 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 UBXN11Q5T124 520 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 NT5DC1Q5TFE4 455 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 SRGAP1Q7Z6B7 1085 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 ZBTB33Q86T24 672 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 USP38Q8NB14 1042 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 SLC9A7Q96T83 725 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 CXCL16Q9H2A7 254 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 NXF3Q9H4D5 531 aaKnown RBP13.46□□□□□ -0.25
LINC00963-212ENST00000608669 HPSEQ9Y251 543 aa13.46□□□□□ -0.25
LINC00963-212ENST00000608669 SZT2Q5T011 3432 aa13.46□□□□□ -0.26
LINC00963-212ENST00000608669 NLRC5Q86WI3 1866 aa13.46□□□□□ -0.26
LINC00963-212ENST00000608669 TTC3P53804 2025 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms