RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 OTUD6AQ7L8S5 288 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 KSR1Q8IVT5 923 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 ABI1Q8IZP0 508 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 SMRP1Q8NCR6 262 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 SLC7A3Q8WY07 619 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 CEP170P1Q96L14 293 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 ZNF558Q96NG5 402 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 LRFN3Q9BTN0 628 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 TLE6Q9H808 572 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 RGL1Q9NZL6 768 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 COL4A3BPQ9Y5P4 624 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 ASAP2O43150 1006 aa14.9□□□□□ -0.02
CTSA-213ENST00000606782 DUSP6Q16828 381 aa14.9□□□□□ -0.02
CTSA-213ENST00000606782 TMEM31Q5JXX7 168 aa14.9□□□□□ -0.02
CTSA-213ENST00000606782 SRGAP1Q7Z6B7 1085 aa14.9□□□□□ -0.02
CTSA-213ENST00000606782 DIS3L2Q8IYB7 885 aaKnown RBP14.9□□□□□ -0.02
CTSA-213ENST00000606782 PRPF31Q8WWY3 499 aaKnown RBP14.9□□□□□ -0.02
CTSA-213ENST00000606782 DYDC2Q96IM9 177 aa14.9□□□□□ -0.02
CTSA-213ENST00000606782 MTMR9Q96QG7 549 aa14.9□□□□□ -0.02
CTSA-213ENST00000606782 MRPL9Q9BYD2 267 aaKnown RBP14.9□□□□□ -0.02
CTSA-213ENST00000606782 FOXP1Q9H334 677 aaPredicted RBP14.9□□□□□ -0.02
CTSA-213ENST00000606782 PUF60Q9UHX1 559 aaKnown RBP14.9□□□□□ -0.02
CTSA-213ENST00000606782 PCDHA12Q9UN75 941 aa14.9□□□□□ -0.02
CTSA-213ENST00000606782 PCDHGC5Q9Y5F6 944 aa14.9□□□□□ -0.02
CTSA-213ENST00000606782 CARNS1A5YM72 827 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 MARCH6O60337 910 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 ALADP13716 330 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 U2AF2P26368 475 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTSA-213ENST00000606782 SSTR3P32745 418 aaPredicted RBP14.89□□□□□ -0.03
CTSA-213ENST00000606782 NDUFV1P49821 464 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 RAB27AP51159 221 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 FOSBP53539 338 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 POLGP54098 1239 aaPredicted RBP14.89□□□□□ -0.03
CTSA-213ENST00000606782 KRT17Q04695 432 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 POU5F1BQ06416 359 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 LAMTOR4Q0VGL1 99 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 PCBP1Q15365 356 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTSA-213ENST00000606782 SAFBQ15424 915 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTSA-213ENST00000606782 NCAPH2Q6IBW4 605 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 CATSPER4Q7RTX7 472 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 MRPL10Q7Z7H8 261 aaKnown RBP14.89□□□□□ -0.03
CTSA-213ENST00000606782 RBM23Q86U06 439 aaKnown RBP14.89□□□□□ -0.03
CTSA-213ENST00000606782 SLC39A11Q8N1S5 342 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 HELQQ8TDG4 1101 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 MICAL1Q8TDZ2 1067 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 TCP11Q8WWU5 503 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 PSPC1Q8WXF1 523 aaKnown RBP14.89□□□□□ -0.03
CTSA-213ENST00000606782 NLRP4Q96MN2 994 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 POP1Q99575 1024 aaKnown RBP14.89□□□□□ -0.03
CTSA-213ENST00000606782 EIF2AK1Q9BQI3 630 aaKnown RBP14.89□□□□□ -0.03
CTSA-213ENST00000606782 NGRNQ9NPE2 291 aaKnown RBP14.89□□□□□ -0.03
CTSA-213ENST00000606782 AGPAT5Q9NUQ2 364 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 FAM105AQ9NUU6 356 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 SPG21Q9NZD8 308 aa14.89□□□□□ -0.03
CTSA-213ENST00000606782 ARIH1Q9Y4X5 557 aaPredicted RBP14.89□□□□□ -0.03
CTSA-213ENST00000606782 H3BQV1 296 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 WNT7AO00755 349 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 ZBTB39O15060 712 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 CSPG5O95196 566 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 XRCC6P12956 609 aaKnown RBP eCLIP14.88□□□□□ -0.03
CTSA-213ENST00000606782 HOXA11P31270 313 aaPredicted RBP14.88□□□□□ -0.03
CTSA-213ENST00000606782 CTTNQ14247 550 aaKnown RBP14.88□□□□□ -0.03
CTSA-213ENST00000606782 EMC2Q15006 297 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 CLUL1Q15846 466 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 CALCRLQ16602 461 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 XKR9Q5GH70 373 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 TWF2Q6IBS0 349 aaKnown RBP14.88□□□□□ -0.03
CTSA-213ENST00000606782 FERMT3Q86UX7 667 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 IFNLR1Q8IU57 520 aaPredicted RBP14.88□□□□□ -0.03
CTSA-213ENST00000606782 RNF169Q8NCN4 708 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 VN1R2Q8NFZ6 395 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 TMEM143Q96AN5 459 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 TTC12Q9H892 705 aaPredicted RBP14.88□□□□□ -0.03
CTSA-213ENST00000606782 MINDY3Q9H8M7 445 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 XPNPEP1Q9NQW7 623 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 ANKEF1Q9NU02 776 aa14.88□□□□□ -0.03
CTSA-213ENST00000606782 PIN4Q9Y237 131 aaKnown RBP14.88□□□□□ -0.03
CTSA-213ENST00000606782 PER2O15055 1255 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 DCXO43602 365 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 STX6O43752 255 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 OFD1O75665 1012 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 BCAR1P56945 870 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 CYP4A11Q02928 519 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 MXD4Q14582 209 aaPredicted RBP14.87□□□□□ -0.03
CTSA-213ENST00000606782 TPH2Q8IWU9 490 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 SUSD6Q92537 303 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 TCF25Q9BQ70 676 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 BARX2Q9UMQ3 279 aaPredicted RBP14.87□□□□□ -0.03
CTSA-213ENST00000606782 MTMR6Q9Y217 621 aa14.87□□□□□ -0.03
CTSA-213ENST00000606782 NEMFO60524 1076 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 DGAT1O75907 488 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 SRGAP2CP0DJJ0 459 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 DDIT3P35638 169 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 PBX3P40426 434 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 ALDH7A1P49419 539 aaKnown RBP14.86□□□□□ -0.03
CTSA-213ENST00000606782 PTENP60484 403 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 ORC2Q13416 577 aaPredicted RBP14.86□□□□□ -0.03
CTSA-213ENST00000606782 NOMO2Q5JPE7 1267 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 UBXN11Q5T124 520 aa14.86□□□□□ -0.03
CTSA-213ENST00000606782 GLB1LQ6UWU2 654 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms