RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 JMJD4Q9H9V9 463 aa6.12□□□□□ -1.43
TUBE1-209ENST00000604814 TUBD1Q9UJT1 453 aa6.12□□□□□ -1.43
TUBE1-209ENST00000604814 SYNRGQ9UMZ2 1314 aa6.12□□□□□ -1.43
TUBE1-209ENST00000604814 F5H0A9 414 aaPredicted RBP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 HOXC11O43248 304 aaPredicted RBP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 KDM1AO60341 852 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 SOAT2O75908 522 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 HSPA4LO95757 839 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ITGA4P13612 1032 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ATP6V1B1P15313 513 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 YBX3P16989 372 aaKnown RBP eCLIP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 LSP1P33241 339 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 HSPA7P48741 367 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ALDH9A1P49189 494 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 DNM2P50570 870 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 TMF1P82094 1093 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ID3Q02535 119 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 NFIAQ12857 509 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 SMAD2Q15796 467 aaKnown RBP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 KIF4BQ2VIQ3 1234 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ZACNQ401N2 412 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 RNF43Q68DV7 783 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ISM2Q6H9L7 571 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 DENND5AQ6IQ26 1287 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 SLC30A6Q6NXT4 461 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 FAM47EQ6ZV65 393 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 MAEAQ7L5Y9 396 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 CATSPER4Q7RTX7 472 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 OVCH1Q7RTY7 1134 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 SLC51AQ86UW1 340 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 CARNMT1Q8N4J0 409 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 SIMC1Q8NDZ2 872 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 SSH1Q8WYL5 1049 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 CGRRF1Q99675 332 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 SLF1Q9BQI6 1058 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 UNKQ9C0B0 810 aaKnown RBP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 TSPY26PQ9H489 355 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 NOL6Q9H6R4 1146 aaKnown RBP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 CNTD2Q9H8S5 307 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PLSCR4Q9NRQ2 329 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 RABL2BQ9UNT1 228 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PA2G4Q9UQ80 394 aaKnown RBP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 RRP7AQ9Y3A4 280 aaKnown RBP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ACKR2O00590 384 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 KRT37O76014 449 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PAPLNO95428 1278 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 STARD3NLO95772 234 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 SCG5P05408 212 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 KCNA2P16389 499 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 TNNT3P45378 269 aaPredicted RBP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PHC1P78364 1004 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 CDC16Q13042 620 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 MPEG1Q2M385 716 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 TOR2AQ5JU69 321 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 KDELC2Q7Z4H8 507 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 C12orf40Q86WS4 652 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 CISD2Q8N5K1 135 aaKnown RBP6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PPM1NQ8N819 430 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 C2orf69Q8N8R5 385 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PCDH19Q8TAB3 1148 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 BRI3BPQ8WY22 251 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 CENPTQ96BT3 561 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 CNPPD1Q9BV87 410 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ZDHHC5Q9C0B5 715 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ZWILCHQ9H900 591 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PIDD1Q9HB75 910 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 GP6Q9HCN6 339 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 PDRG1Q9NUG6 133 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 ABCF3Q9NUQ8 709 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 FAM105AQ9NUU6 356 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 CSADQ9Y600 493 aa6.11□□□□□ -1.43
TUBE1-209ENST00000604814 SYNGAP1Q96PV0 1343 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.1□□□□□ -1.43
TUBE1-209ENST00000604814 LCHNA4D1U4 455 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 H7C0S8 307 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 SHOXO15266 292 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 HTATSF1O43719 755 aaKnown RBP6.1□□□□□ -1.43
TUBE1-209ENST00000604814 DOK2O60496 412 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 USO1O60763 962 aaKnown RBP6.1□□□□□ -1.43
TUBE1-209ENST00000604814 EOMESO95936 686 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 THP07101 528 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 NFICP08651 508 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 HARSP12081 509 aaKnown RBP6.1□□□□□ -1.43
TUBE1-209ENST00000604814 ATF7P17544 494 aaPredicted RBP6.1□□□□□ -1.43
TUBE1-209ENST00000604814 HPDP32754 393 aaPredicted RBP6.1□□□□□ -1.43
TUBE1-209ENST00000604814 ACTN2P35609 894 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 CEBPAP49715 358 aaPredicted RBP6.1□□□□□ -1.43
TUBE1-209ENST00000604814 GPR85P60893 370 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 PAK1Q13153 545 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 SMAD1Q15797 465 aaKnown RBP6.1□□□□□ -1.43
TUBE1-209ENST00000604814 ASIC2Q16515 512 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 TIGD6Q17RP2 521 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 ANKRD39Q53RE8 183 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 FBXO47Q5MNV8 452 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 ANKRD13BQ86YJ7 626 aa6.1□□□□□ -1.43
TUBE1-209ENST00000604814 MCATQ8IVS2 390 aaKnown RBP6.1□□□□□ -1.43
TUBE1-209ENST00000604814 LSM14AQ8ND56 463 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms