RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 KIFAP3Q92845 792 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 SAAL1Q96ER3 474 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 ANKZF1Q9H8Y5 726 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 XPNPEP1Q9NQW7 623 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
CCDC12-211ENST00000604367 DDX41Q9UJV9 622 aaKnown RBP16.4■□□□□ 0.22
CCDC12-211ENST00000604367 BZW2Q9Y6E2 419 aaKnown RBP16.4■□□□□ 0.22
CCDC12-211ENST00000604367 SOWAHBA6NEL2 793 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 SPDYE5A6NIY4 337 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 NCK2O43639 380 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 CNGA1P29973 690 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 DRAP1Q14919 205 aaPredicted RBP16.4■□□□□ 0.22
CCDC12-211ENST00000604367 ARHGAP44Q17R89 818 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 CBWD2Q8IUF1 395 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 TXNRD2Q9NNW7 524 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.4■□□□□ 0.225e-9■■■■■ 51.3
CCDC12-211ENST00000604367 ZNF302Q9NR11 478 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 EXOC7Q9UPT5 735 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 ADGRA3Q8IWK6 1321 aa16.4■□□□□ 0.22
CCDC12-211ENST00000604367 F8VZ95 297 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 EVI5O60447 810 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 PGK2P07205 417 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 CXCR5P32302 372 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 STAT1P42224 750 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 C12orf56Q8IXR9 622 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 CCDC127Q96BQ5 260 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 OPTNQ96CV9 577 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 ATP6V0A4Q9HBG4 840 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 APEX2Q9UBZ4 518 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 PAPPA2Q9BXP8 1791 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 FAM170AA1A519 330 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 ADRB2P07550 413 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 ATP4AP20648 1035 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 UBA1P22314 1058 aaKnown RBP16.39■□□□□ 0.21
CCDC12-211ENST00000604367 ICAM3P32942 547 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 PRKCIP41743 596 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 XKR3Q5GH77 459 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 PHLDB3Q6NSJ2 640 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 NFRKBQ6P4R8 1299 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 MAP4K3Q8IVH8 894 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 SLC17A8Q8NDX2 589 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 MCPH1Q8NEM0 835 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 STK33Q9BYT3 514 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 NAGPAQ9UK23 515 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 SNX12Q9UMY4 172 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 SYNGAP1Q96PV0 1343 aa16.39■□□□□ 0.21
CCDC12-211ENST00000604367 CXCL11O14625 94 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 SOX5P35711 763 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 DNA2P51530 1060 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 POLGP54098 1239 aaPredicted RBP16.38■□□□□ 0.21
CCDC12-211ENST00000604367 NAB2Q15742 525 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 SNRNP35Q16560 246 aaKnown RBP16.38■□□□□ 0.21
CCDC12-211ENST00000604367 WDR78Q5VTH9 848 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 USP50Q70EL3 339 aaPredicted RBP16.38■□□□□ 0.21
CCDC12-211ENST00000604367 RNF10Q8N5U6 811 aaKnown RBP16.38■□□□□ 0.21
CCDC12-211ENST00000604367 COG1Q8WTW3 980 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 PNKPQ96T60 521 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 POLR3FQ9H1D9 316 aaPredicted RBP16.38■□□□□ 0.21
CCDC12-211ENST00000604367 IGSF9BQ9UPX0 1349 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 PDE2AO00408 941 aaPredicted RBP16.38■□□□□ 0.21
CCDC12-211ENST00000604367 CNMDO75829 334 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 FERP16591 822 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 Q3C1V9 767 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 C1orf220Q5T0J3 134 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 ALKBH5Q6P6C2 394 aaKnown RBP16.38■□□□□ 0.21
CCDC12-211ENST00000604367 LMO3Q8TAP4 145 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 TMEM143Q96AN5 459 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 NTPCRQ9BSD7 190 aaKnown RBP16.38■□□□□ 0.21
CCDC12-211ENST00000604367 MAF1Q9H063 256 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 PDLIM7Q9NR12 457 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 AGTPBP1Q9UPW5 1226 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 USP20Q9Y2K6 914 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 ARID2Q68CP9 1835 aa16.38■□□□□ 0.21
CCDC12-211ENST00000604367 HNRNPDLO14979 420 aaKnown RBP16.37■□□□□ 0.21
CCDC12-211ENST00000604367 PALMO75781 387 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 CETN1Q12798 172 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 VPS36Q86VN1 386 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 SPIRE2Q8WWL2 714 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 POMGNT1Q8WZA1 660 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 GPR88Q9GZN0 384 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 C17orf75Q9HAS0 396 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 MAFBQ9Y5Q3 323 aaPredicted RBP16.37■□□□□ 0.21
CCDC12-211ENST00000604367 A0A0G2JMZ2 1700 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 FARP2O94887 1054 aaPredicted RBP16.37■□□□□ 0.21
CCDC12-211ENST00000604367 OATP04181 439 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 SNRPFP62306 86 aaKnown RBP16.37■□□□□ 0.21
CCDC12-211ENST00000604367 EMC2Q15006 297 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 CC2D1AQ6P1N0 951 aaPredicted RBP16.37■□□□□ 0.21
CCDC12-211ENST00000604367 SLC39A4Q6P5W5 647 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 TMEM174Q8WUU8 243 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 BICD1Q96G01 975 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 IFT74Q96LB3 600 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 OSBPL9Q96SU4 736 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 POP1Q99575 1024 aaKnown RBP16.37■□□□□ 0.21
CCDC12-211ENST00000604367 UBE2TQ9NPD8 197 aaPredicted RBP16.37■□□□□ 0.21
CCDC12-211ENST00000604367 OGFRQ9NZT2 677 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 RBPJLQ9UBG7 517 aa16.37■□□□□ 0.21
CCDC12-211ENST00000604367 DDX3XO00571 662 aaKnown RBP eCLIP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms