RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 NYAP1Q6ZVC0 841 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 TRIM7Q9C029 511 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 PCDHB7Q9Y5E2 793 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 ITKQ08881 620 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 NOGQ13253 232 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 CACNA2D3Q8IZS8 1091 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 BEST2Q8NFU1 509 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 PPP1R9AQ9ULJ8 1098 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 STXBP3O00186 592 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 LDHAP00338 332 aaKnown RBP11.9□□□□□ -0.5
ZNF558-207ENST00000601372 TOB1P50616 345 aaPredicted RBP11.9□□□□□ -0.5
ZNF558-207ENST00000601372 VSNL1P62760 191 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 PTPAQ15257 358 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 TRIM50Q86XT4 487 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 EXOC4Q96A65 974 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 BZW2Q9Y6E2 419 aaKnown RBP11.9□□□□□ -0.5
ZNF558-207ENST00000601372 RPS6KA5O75582 802 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 THPOP40225 353 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 HHATQ5VTY9 493 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 TMEM143Q96AN5 459 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.5
ZNF558-207ENST00000601372 RGL1Q9NZL6 768 aa11.9□□□□□ -0.5
ZNF558-207ENST00000601372 PGRMC1O00264 195 aaKnown RBP11.9□□□□□ -0.51
ZNF558-207ENST00000601372 ACTN1P12814 892 aa11.9□□□□□ -0.51
ZNF558-207ENST00000601372 PTK2Q05397 1052 aa11.9□□□□□ -0.51
ZNF558-207ENST00000601372 MAGOHBQ96A72 148 aaKnown RBP11.9□□□□□ -0.51
ZNF558-207ENST00000601372 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.51
ZNF558-207ENST00000601372 BAIAP2L1Q9UHR4 511 aa11.9□□□□□ -0.51
ZNF558-207ENST00000601372 A6NNZ2 444 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 TUBB8Q3ZCM7 444 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 LRRN4CLQ8ND94 238 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 FAM213AQ9BRX8 229 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 STARD7Q9NQZ5 370 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 PLAAQ9Y263 795 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 FKTNO75072 461 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 INHBEP58166 350 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 GRIK5Q16478 980 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 CCDC89Q8N998 374 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 P2RX7Q99572 595 aaKnown RBP11.89□□□□□ -0.51
ZNF558-207ENST00000601372 MXRA8Q9BRK3 442 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 CNTNAP5Q8WYK1 1306 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 IFNB1P01574 187 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 CRY2Q49AN0 593 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 GMCL1P1Q8NEA9 526 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 RNF208Q9H0X6 261 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 NMRK2Q9NPI5 230 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 DNAJC17Q9NVM6 304 aaKnown RBP11.89□□□□□ -0.51
ZNF558-207ENST00000601372 ERAP1Q9NZ08 941 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 CEP72Q9P209 647 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 PPP1R3GB7ZBB8 358 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 STX2P32856 288 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 DHX9Q08211 1270 aaKnown RBP11.89□□□□□ -0.51
ZNF558-207ENST00000601372 FYB2Q5VWT5 728 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 RBM43Q6ZSC3 357 aaKnown RBP11.89□□□□□ -0.51
ZNF558-207ENST00000601372 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
ZNF558-207ENST00000601372 SOCS4Q8WXH5 440 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 ZNF653Q96CK0 615 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 RAB20Q9NX57 234 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 GYPCP04921 128 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 ADORA2AP29274 412 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 DSG3P32926 999 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 TCF7P36402 384 aaPredicted RBP11.89□□□□□ -0.51
ZNF558-207ENST00000601372 FAM149B1Q96BN6 582 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 LRRC4Q9HBW1 653 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 LIMA1Q9UHB6 759 aaKnown RBP11.89□□□□□ -0.51
ZNF558-207ENST00000601372 FAM169AQ9Y6X4 670 aa11.89□□□□□ -0.51
ZNF558-207ENST00000601372 SHMT1P34896 483 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 PPP2R5DQ14738 602 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 CCDC14Q49A88 953 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 SCN4BQ8IWT1 228 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 MIS12Q9H081 205 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 TMEM60Q9H2L4 133 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 CAPN11Q9UMQ6 739 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 TAL1P17542 331 aaPredicted RBP11.88□□□□□ -0.51
ZNF558-207ENST00000601372 SP3Q02447 781 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 EPHA7Q15375 998 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 CLUL1Q15846 466 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 CERS5Q8N5B7 392 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 TXNDC16Q9P2K2 825 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 NOVA2Q9UNW9 492 aaKnown RBP11.88□□□□□ -0.51
ZNF558-207ENST00000601372 PPFIA4O75335 1185 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 ATF2P15336 505 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 ERVK-9P63128 1117 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 ERVK-24P63145 666 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 TBC1D31Q96DN5 1066 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 CYP2C9P11712 490 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 TSPY1Q01534 308 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 EFCAB12Q6NXP0 572 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 TACO1Q9BSH4 297 aaKnown RBP11.88□□□□□ -0.51
ZNF558-207ENST00000601372 SEPT10Q9P0V9 454 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 PDS5AQ29RF7 1337 aaKnown RBP11.88□□□□□ -0.51
ZNF558-207ENST00000601372 PQBP1O60828 265 aaKnown RBP11.88□□□□□ -0.51
ZNF558-207ENST00000601372 HIP1RO75146 1068 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 KCNH2Q12809 1159 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 RSRC1Q96IZ7 334 aaKnown RBP11.88□□□□□ -0.51
ZNF558-207ENST00000601372 HMX1Q9NP08 348 aaPredicted RBP11.88□□□□□ -0.51
ZNF558-207ENST00000601372 PTPRAP18433 802 aa11.88□□□□□ -0.51
ZNF558-207ENST00000601372 KIAA1683Q9H0B3 1180 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms