RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 SLC29A2Q14542 456 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 OTUD6AQ7L8S5 288 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 PHLDB2Q86SQ0 1253 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 STARD8Q92502 1023 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 USP6NLQ92738 828 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 NSMCE3Q96MG7 304 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 TUBGCP2Q9BSJ2 902 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 PITPNM3Q9BZ71 974 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 FHDC1Q9C0D6 1143 aaPredicted RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 CCDC68Q9H2F9 335 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 QPCTLQ9NXS2 382 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 SSX2IPQ9Y2D8 614 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
NFKB1-212ENST00000600343 SH3PXD2BA1X283 911 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 FOXO3O43524 673 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 SEPT6Q14141 434 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 RPS6KA1Q15418 735 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 RILPL1Q5EBL4 403 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 TMTC3Q6ZXV5 915 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 EPB41L4BQ9H329 900 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 PARVBQ9HBI1 364 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 STRN4Q9NRL3 753 aa10.55□□□□□ -0.72
NFKB1-212ENST00000600343 A0A1W2PQJ5 194 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 BTBD18B2RXH4 712 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 TRAFD1O14545 582 aaPredicted RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 RASGRF2O14827 1237 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 STRNO43815 780 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 ZNF862O60290 1169 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 ZBED1O96006 694 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 YARSP54577 528 aaKnown RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 FAM209AQ5JX71 171 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 PLEKHO2Q8TD55 490 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 MAELQ96JY0 434 aaKnown RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 TXLNGYQ9BZA5 131 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 SCHIP1Q9P0W5 487 aaPredicted RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 GDAQ9Y2T3 454 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 CEP170BQ9Y4F5 1589 aaPredicted RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 UNCXA6NJT0 531 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 TTLL13PA6NNM8 815 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 PRCPP42785 496 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 EIF2B2P49770 351 aaKnown RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 ZNF658Q5TYW1 1059 aaPredicted RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 ANO5Q75V66 913 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 HPS3Q969F9 1004 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 ITPKCQ96DU7 683 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 CELF4Q9BZC1 486 aaKnown RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 CEP44Q9C0F1 390 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 TLE6Q9H808 572 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 CCDC188H7C350 402 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 PGRMC1O00264 195 aaKnown RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 NDC80O14777 642 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 HSPD1P10809 573 aaKnown RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 RXRAP19793 462 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 MED21Q13503 144 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 CTC1Q2NKJ3 1217 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 CYB5R4Q7L1T6 521 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 SYMPKQ92797 1274 aaKnown RBP10.54□□□□□ -0.72
NFKB1-212ENST00000600343 MCUR1Q96AQ8 359 aa10.54□□□□□ -0.72
NFKB1-212ENST00000600343 PI4KAP2A4QPH2 592 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 HAND2P61296 217 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 SYCP2LQ5T4T6 812 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 CCDC82Q8N4S0 544 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 SKA1Q96BD8 255 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 CADM1Q9BY67 442 aaKnown RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 EBF3Q9H4W6 596 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 SLITRK6Q9H5Y7 841 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 MKS1Q9NXB0 559 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 SUGT1Q9Y2Z0 365 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 DGKIO75912 1065 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 PHBP35232 272 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 TDRD12Q587J7 1177 aaKnown RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 COX4I2Q96KJ9 171 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 MIPEPQ99797 713 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 TRIM51Q9BSJ1 452 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 PLVAPQ9BX97 442 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 DBF4Q9UBU7 674 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 SEL1LQ9UBV2 794 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 MTUS1Q9ULD2 1270 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 CTDP1Q9Y5B0 961 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 IVNS1ABPQ9Y6Y0 642 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 FGFR1OPO95684 399 aaKnown RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 HNRNPH3P31942 346 aaKnown RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 CDC16Q13042 620 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 THOC5Q13769 683 aaKnown RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 AUHQ13825 339 aaKnown RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 CCSAPQ6IQ19 270 aaPredicted RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 RALYLQ86SE5 291 aaKnown RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 NME9Q86XW9 330 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 PASD1Q8IV76 773 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 DIS3L2Q8IYB7 885 aaKnown RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 ESR2Q92731 530 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 TRAF3IP3Q9Y228 551 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 COQ6Q9Y2Z9 468 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 NOC2LQ9Y3T9 749 aaKnown RBP10.53□□□□□ -0.72
NFKB1-212ENST00000600343 TELO2Q9Y4R8 837 aa10.53□□□□□ -0.72
NFKB1-212ENST00000600343 NEXMIFQ5QGS0 1516 aa10.52□□□□□ -0.72
NFKB1-212ENST00000600343 A0A1W2PQ67 120 aa10.52□□□□□ -0.72
NFKB1-212ENST00000600343 FUOMA2VDF0 154 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms