RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 CEP135Q66GS9 1140 aa25.59■■□□□ 1.69
SYMPK-212ENST00000598896 RHPN2Q8IUC4 686 aa25.59■■□□□ 1.69
SYMPK-212ENST00000598896 PXYLP1Q8TE99 480 aa25.59■■□□□ 1.69
SYMPK-212ENST00000598896 TRIM44Q96DX7 344 aaPredicted RBP25.59■■□□□ 1.69
SYMPK-212ENST00000598896 CBWD1Q9BRT8 395 aa25.59■■□□□ 1.69
SYMPK-212ENST00000598896 SETD4Q9NVD3 440 aa25.59■■□□□ 1.69
SYMPK-212ENST00000598896 ANKRD63C9JTQ0 380 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 H0YCG3 227 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 MAGEB2O15479 319 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 SMIM10L2AP0DMW4 78 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 SMIM10L2BP0DMW5 78 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 RARBP10826 455 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 HSPA6P17066 643 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 CYP2J2P51589 502 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 SLC39A4Q6P5W5 647 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 RETREG2Q8NC44 543 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 LMBR1Q8WVP7 490 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 EXOC7Q9UPT5 735 aa25.58■■□□□ 1.69
SYMPK-212ENST00000598896 GOLGA6L6A8MZA4 724 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 UBXN1Q04323 297 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 MAN2A1Q16706 1144 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 GNASQ5JWF2 1037 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 SLC9A9Q8IVB4 645 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 TRIM59Q8IWR1 403 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 RNF149Q8NC42 400 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 USP20Q9Y2K6 914 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 PES1O00541 588 aaKnown RBP25.57■■□□□ 1.68
SYMPK-212ENST00000598896 ADAMTS4O75173 837 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 EDN1P05305 212 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 SRGAP2CP0DJJ0 459 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 ADSSP30520 456 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 PSEN2P49810 448 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 HIC1Q14526 733 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 VWA3BQ502W6 1294 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 CDCA2Q69YH5 1023 aaPredicted RBP25.57■■□□□ 1.68
SYMPK-212ENST00000598896 SPECC1LQ69YQ0 1117 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 C12orf56Q8IXR9 622 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 TMEM174Q8WUU8 243 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 ZNF668Q96K58 619 aaPredicted RBP25.57■■□□□ 1.68
SYMPK-212ENST00000598896 IMPACTQ9P2X3 320 aa25.57■■□□□ 1.68
SYMPK-212ENST00000598896 SLC16A3O15427 465 aaKnown RBP25.56■■□□□ 1.68
SYMPK-212ENST00000598896 DNM2P50570 870 aa25.56■■□□□ 1.68
SYMPK-212ENST00000598896 NKX3-2P78367 333 aa25.56■■□□□ 1.68
SYMPK-212ENST00000598896 MAP2K1Q02750 393 aaPredicted RBP25.56■■□□□ 1.68
SYMPK-212ENST00000598896 ARID5BQ14865 1188 aa25.56■■□□□ 1.68
SYMPK-212ENST00000598896 NDST4Q9H3R1 872 aa25.56■■□□□ 1.68
SYMPK-212ENST00000598896 PCIF1Q9H4Z3 704 aa25.56■■□□□ 1.68
SYMPK-212ENST00000598896 FRMD5Q7Z6J6 570 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 ZSWIM2Q8NEG5 633 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 BORCS6Q96GS4 357 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 NLRP4Q96MN2 994 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 ZNF830Q96NB3 372 aaPredicted RBP25.55■■□□□ 1.68
SYMPK-212ENST00000598896 XPNPEP3Q9NQH7 507 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 CGNQ9P2M7 1197 aaKnown RBP25.55■■□□□ 1.68
SYMPK-212ENST00000598896 PHLPP2Q6ZVD8 1323 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 NRCAMQ92823 1304 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 K7ERI5 159 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 HNRNPDLO14979 420 aaKnown RBP25.55■■□□□ 1.68
SYMPK-212ENST00000598896 ABCD1P33897 745 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 SNRPFP62306 86 aaKnown RBP25.55■■□□□ 1.68
SYMPK-212ENST00000598896 MYBPC2Q14324 1141 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 ARMCX5Q6P1M9 558 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 CCDC113Q9H0I3 377 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 TMEM134Q9H6X4 195 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 HSPBP1Q9NZL4 362 aa25.55■■□□□ 1.68
SYMPK-212ENST00000598896 ARMCX3Q9UH62 379 aaPredicted RBP25.55■■□□□ 1.68
SYMPK-212ENST00000598896 TPM2P07951 284 aa25.54■■□□□ 1.68
SYMPK-212ENST00000598896 EPB41P11171 864 aaKnown RBP25.54■■□□□ 1.68
SYMPK-212ENST00000598896 SCP2P22307 547 aa25.54■■□□□ 1.68
SYMPK-212ENST00000598896 STRN3Q13033 797 aa25.54■■□□□ 1.68
SYMPK-212ENST00000598896 TBX2Q13207 712 aaPredicted RBP25.54■■□□□ 1.68
SYMPK-212ENST00000598896 MKNK1Q9BUB5 465 aa25.54■■□□□ 1.68
SYMPK-212ENST00000598896 TRIM17Q9Y577 477 aa25.54■■□□□ 1.68
SYMPK-212ENST00000598896 DNAH12Q6ZR08 3092 aa25.54■■□□□ 1.68
SYMPK-212ENST00000598896 RRN3P2A6NIE6 340 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 EXOC3O60645 756 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 INHAP05111 366 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 PSMC2P35998 433 aaKnown RBP25.53■■□□□ 1.68
SYMPK-212ENST00000598896 ARHGEF6Q15052 776 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 HS1BP3Q53T59 392 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 NFRKBQ6P4R8 1299 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 CXCL17Q6UXB2 119 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 FAM186BQ8IYM0 893 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 BICD1Q96G01 975 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 BEGAINQ9BUH8 593 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 KATNAL1Q9BW62 490 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 KCNF1Q9H3M0 494 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 SPC25Q9HBM1 224 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.53■■□□□ 1.68
SYMPK-212ENST00000598896 SCN10AQ9Y5Y9 1956 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 MBLAC1A4D2B0 266 aaPredicted RBP25.53■■□□□ 1.68
SYMPK-212ENST00000598896 VTNP04004 478 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 ADAM17P78536 824 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 SLAIN1Q8ND83 568 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 PPP1R16BQ96T49 567 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 DDX20Q9UHI6 824 aaKnown RBP25.53■■□□□ 1.68
SYMPK-212ENST00000598896 AKT3Q9Y243 479 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 PTCH2Q9Y6C5 1203 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 ITIH6Q6UXX5 1313 aa25.53■■□□□ 1.68
SYMPK-212ENST00000598896 TTLL13PA6NNM8 815 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms