RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 CACNA1AO00555 2505 aa18.52■□□□□ 0.55
SHKBP1-215ENST00000597649 SLC11A1P49279 550 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 AFF1P51825 1210 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 KRT32Q14532 448 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 BMS1Q14692 1282 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 PTPN14Q15678 1187 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 NTRK3Q16288 839 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 NOMO2Q5JPE7 1267 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 CABP7Q86V35 215 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 KSR1Q8IVT5 923 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 RIT2Q99578 217 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 CYP26B1Q9NR63 512 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 INPP5FQ9Y2H2 1132 aa18.51■□□□□ 0.55
SHKBP1-215ENST00000597649 CCDC196A0A1B0GTZ2 297 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 GAS7O60861 476 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 LILRB3O75022 631 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 PSMD10O75832 226 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 USP11P51784 963 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 MTERF2Q49AM1 385 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 LRCH2Q5VUJ6 765 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 TWF2Q6IBS0 349 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 B3GNT9Q6UX72 402 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 Q6ZUG5 572 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 GPR149Q86SP6 731 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 TMEM87AQ8NBN3 555 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 FLCNQ8NFG4 579 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 CCDC12Q8WUD4 166 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 MFSD1Q9H3U5 465 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 WDR81Q562E7 1941 aa18.5■□□□□ 0.55
SHKBP1-215ENST00000597649 ZNF623O75123 536 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 DDHD2O94830 711 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 SFNP31947 248 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 JAK3P52333 1124 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 GIT2Q14161 759 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 GLB1LQ6UWU2 654 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 BRF1Q92994 677 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 KLHL5Q96PQ7 755 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 BACH2Q9BYV9 841 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 GBP3Q9H0R5 595 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 FAM105AQ9NUU6 356 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 VPS54Q9P1Q0 977 aa18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 SUCLA2Q9P2R7 463 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 SEPT9Q9UHD8 586 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 PIN4Q9Y237 131 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-215ENST00000597649 CNPP09543 421 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 CLCN4P51793 760 aa18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 CDC42EP1Q00587 391 aa18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 XKR3Q5GH77 459 aa18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 AGMOQ6ZNB7 445 aa18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 MIER3Q7Z3K6 550 aa18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 RHPN2Q8IUC4 686 aa18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 BICD2Q8TD16 824 aa18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 TEKT3Q9BXF9 490 aa18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 KCNK12Q9HB15 430 aa18.48■□□□□ 0.55
SHKBP1-215ENST00000597649 NID2Q14112 1375 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 DDX11L8A8MPP1 907 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 N4BP1O75113 896 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 MAFO75444 373 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 SSBP05455 408 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 HMGB1P09429 215 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 AOC1P19801 751 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 SFPQP23246 707 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 FGD1P98174 961 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 FOXK2Q01167 660 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 RNASELQ05823 741 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 TDGQ13569 410 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 ANO5Q75V66 913 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 KCNB2Q92953 911 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 NKD2Q969F2 451 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 ACSF2Q96CM8 615 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 SFXN1Q9H9B4 322 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 IFT122Q9HBG6 1241 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 SNX14Q9Y5W7 946 aa18.47■□□□□ 0.55
SHKBP1-215ENST00000597649 TDP2O95551 362 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 SKIP12755 728 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 KLRC2P26717 231 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 PSMA5P28066 241 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 DNM2P50570 870 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 Q4G0T1 1027 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 OTOP3Q7RTS5 596 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 TAS1R1Q7RTX1 841 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 CATSPER4Q7RTX7 472 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 MRPL10Q7Z7H8 261 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 ZNF410Q86VK4 478 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 PPFIBP1Q86W92 1011 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 ADSSL1Q8N142 457 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 ZNF579Q8NAF0 562 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 RDM1Q8NG50 284 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 TBCKQ8TEA7 893 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 RSPH1Q8WYR4 309 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 JAKMIP1Q96N16 626 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 SLC26A6Q9BXS9 759 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 PCDHB2Q9Y5E7 798 aa18.46■□□□□ 0.55
SHKBP1-215ENST00000597649 CYP3A7-CYP3A51PA0A087WV96 503 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 NARSO43776 548 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 CYP3A7P24462 503 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 HOXA11P31270 313 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 AKAP17AQ02040 695 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 UBXN11Q5T124 520 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 PLA2G4FQ68DD2 849 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms