RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 KCNJ14Q9UNX9 436 aa17.86■□□□□ 0.45
LINC02560-201ENST00000596379 INPP5FQ9Y2H2 1132 aa17.86■□□□□ 0.45
LINC02560-201ENST00000596379 NR2E1Q9Y466 385 aa17.86■□□□□ 0.45
LINC02560-201ENST00000596379 EPB41L2O43491 1005 aaKnown RBP17.85■□□□□ 0.45
LINC02560-201ENST00000596379 ZNF623O75123 536 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 OFD1O75665 1012 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 NPEPPSP55786 919 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 ITIH3Q06033 890 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 NOMO2Q5JPE7 1267 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 GLB1LQ6UWU2 654 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 DDX53Q86TM3 631 aaKnown RBP17.85■□□□□ 0.45
LINC02560-201ENST00000596379 FAM177A1Q8N128 213 aaPredicted RBP17.85■□□□□ 0.45
LINC02560-201ENST00000596379 ZNF579Q8NAF0 562 aaKnown RBP17.85■□□□□ 0.45
LINC02560-201ENST00000596379 IGSF21Q96ID5 467 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 JPH2Q9BR39 696 aaPredicted RBP17.85■□□□□ 0.45
LINC02560-201ENST00000596379 TM6SF1Q9BZW5 370 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 ZBP1Q9H171 429 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 POMKQ9H5K3 350 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 IFT122Q9HBG6 1241 aa17.85■□□□□ 0.45
LINC02560-201ENST00000596379 KMT2EQ8IZD2 1858 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.84■□□□□ 0.45
LINC02560-201ENST00000596379 GALTP07902 379 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 WEE2P0C1S8 567 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 QARSP47897 775 aaKnown RBP17.84■□□□□ 0.45
LINC02560-201ENST00000596379 RAB27AP51159 221 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 PTPN5P54829 565 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 C12orf76Q8N812 135 aaPredicted RBP17.84■□□□□ 0.45
LINC02560-201ENST00000596379 TMEM87AQ8NBN3 555 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 BCL7CQ8WUZ0 217 aaPredicted RBP17.84■□□□□ 0.45
LINC02560-201ENST00000596379 RSPH1Q8WYR4 309 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 NECTIN4Q96NY8 510 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 PRRX2Q99811 253 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 KCNMB3Q9NPA1 279 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 PDRG1Q9NUG6 133 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 VAV3Q9UKW4 847 aa17.84■□□□□ 0.45
LINC02560-201ENST00000596379 CCDC194A0A1B0GVG4 234 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 C2CD4DB7Z1M9 353 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 P4HBP07237 508 aaKnown RBP17.83■□□□□ 0.44
LINC02560-201ENST00000596379 SRGAP2CP0DJJ0 459 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 CTSAP10619 480 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 AVPR2P30518 371 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 MTHFRP42898 656 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 POLGP54098 1239 aaPredicted RBP17.83■□□□□ 0.44
LINC02560-201ENST00000596379 VCPP55072 806 aaKnown RBP17.83■□□□□ 0.44
LINC02560-201ENST00000596379 RNASELQ05823 741 aaKnown RBP17.83■□□□□ 0.44
LINC02560-201ENST00000596379 TCF15Q12870 199 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 RARS2Q5T160 578 aaKnown RBP17.83■□□□□ 0.44
LINC02560-201ENST00000596379 KANK3Q6NY19 840 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 KREMEN2Q8NCW0 462 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 SLC7A3Q8WY07 619 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 TMEM143Q96AN5 459 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 PGBD4Q96DM1 585 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 CEP170P1Q96L14 293 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 FAM20AQ96MK3 541 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 PHF20Q9BVI0 1012 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 GBP3Q9H0R5 595 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 WRAP73Q9P2S5 460 aaPredicted RBP17.83■□□□□ 0.44
LINC02560-201ENST00000596379 DNAJB4Q9UDY4 337 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 PCDHB2Q9Y5E7 798 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 COL4A3BPQ9Y5P4 624 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 IRAK3Q9Y616 596 aa17.83■□□□□ 0.44
LINC02560-201ENST00000596379 CARNS1A5YM72 827 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 DKC1O60832 514 aaKnown RBP eCLIP17.82■□□□□ 0.44
LINC02560-201ENST00000596379 DTNBO60941 627 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 EPCAMP16422 314 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 SLC11A1P49279 550 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 SCRN1Q12765 414 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 GIT2Q14161 759 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 PPP4R3AQ6IN85 833 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 AGMOQ6ZNB7 445 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 NEK8Q86SG6 692 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 ZNF280BQ86YH2 543 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 SLC22A17Q8WUG5 538 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 PRPF31Q8WWY3 499 aaKnown RBP17.82■□□□□ 0.44
LINC02560-201ENST00000596379 HAS1Q92839 578 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 RIPOR3Q96MK2 946 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 DHX33Q9H6R0 707 aaKnown RBP17.82■□□□□ 0.44
LINC02560-201ENST00000596379 AGPAT5Q9NUQ2 364 aa17.82■□□□□ 0.44
LINC02560-201ENST00000596379 B4GALT3O60512 393 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 CCNT1O60563 726 aaKnown RBP17.81■□□□□ 0.44
LINC02560-201ENST00000596379 PDGFBP01127 241 aaPredicted RBP17.81■□□□□ 0.44
LINC02560-201ENST00000596379 EPHA7Q15375 998 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 ATAT1Q5SQI0 421 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 PIK3AP1Q6ZUJ8 805 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 SRGAP1Q7Z6B7 1085 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 MRPL10Q7Z7H8 261 aaKnown RBP17.81■□□□□ 0.44
LINC02560-201ENST00000596379 EXOC8Q8IYI6 725 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 OXER1Q8TDS5 423 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 VN1R3Q9BXE9 311 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 MINDY3Q9H8M7 445 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 BMP2KQ9NSY1 1161 aaPredicted RBP17.81■□□□□ 0.44
LINC02560-201ENST00000596379 GJB4Q9NTQ9 266 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 DZANK1Q9NVP4 752 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 SORCS3Q9UPU3 1222 aa17.81■□□□□ 0.44
LINC02560-201ENST00000596379 MARCH6O60337 910 aa17.8■□□□□ 0.44
LINC02560-201ENST00000596379 CDKL5O76039 1030 aa17.8■□□□□ 0.44
LINC02560-201ENST00000596379 DDHD2O94830 711 aa17.8■□□□□ 0.44
LINC02560-201ENST00000596379 GCFC2P16383 781 aaKnown RBP17.8■□□□□ 0.44
LINC02560-201ENST00000596379 HOXA11P31270 313 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms