RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 A0A0U1RQF3 1178 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 NEMFO60524 1076 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 TECP42680 631 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 TOB1P50616 345 aaPredicted RBP17.84■□□□□ 0.45
USHBP1-205ENST00000595993 GPC3P51654 580 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 JAK3P52333 1124 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 SPIRE1Q08AE8 756 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
USHBP1-205ENST00000595993 MCTP1Q6DN14 999 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 MIER3Q7Z3K6 550 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 SUGP1Q8IWZ8 645 aaKnown RBP17.84■□□□□ 0.45
USHBP1-205ENST00000595993 SLC39A11Q8N1S5 342 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 INTS4Q96HW7 963 aaKnown RBP17.84■□□□□ 0.45
USHBP1-205ENST00000595993 MAP7D2Q96T17 732 aa17.84■□□□□ 0.45
USHBP1-205ENST00000595993 H3BQV1 296 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 EOMESO95936 686 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 OATP04181 439 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 DARSP14868 501 aaKnown RBP17.83■□□□□ 0.44
USHBP1-205ENST00000595993 ZSCAN20P17040 1043 aaPredicted RBP17.83■□□□□ 0.44
USHBP1-205ENST00000595993 TMOD1P28289 359 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 SFNP31947 248 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 MCM7P33993 719 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 PPP2R5CQ13362 524 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 TARBP2Q15633 366 aaKnown RBP17.83■□□□□ 0.44
USHBP1-205ENST00000595993 ZNF174Q15697 407 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 CALCRLQ16602 461 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 TTC38Q5R3I4 469 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 HSCBQ8IWL3 235 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 LRRC71Q8N4P6 559 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 MRPL43Q8N983 215 aaKnown RBP17.83■□□□□ 0.44
USHBP1-205ENST00000595993 MTMR9Q96QG7 549 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 TRAIPQ9BWF2 469 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 ENTPD7Q9NQZ7 604 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 SPG21Q9NZD8 308 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 AKT3Q9Y243 479 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 CACNA1HO95180 2353 aa17.83■□□□□ 0.44
USHBP1-205ENST00000595993 PBX3P40426 434 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 VCPP55072 806 aaKnown RBP17.82■□□□□ 0.44
USHBP1-205ENST00000595993 PRKCEQ02156 737 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 KRT17Q04695 432 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 SLFN12Q8IYM2 578 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 RDM1Q8NG50 284 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 RSPH1Q8WYR4 309 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 CEP89Q96ST8 783 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 NRBP2Q9NSY0 501 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 HCFC2Q9Y5Z7 792 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 DMDP11532 3685 aa17.82■□□□□ 0.44
USHBP1-205ENST00000595993 C2orf71A6NGG8 1288 aa17.81■□□□□ 0.44
USHBP1-205ENST00000595993 MARCH6O60337 910 aa17.81■□□□□ 0.44
USHBP1-205ENST00000595993 TRAPPC10P48553 1259 aa17.81■□□□□ 0.44
USHBP1-205ENST00000595993 TRMT1LQ7Z2T5 733 aaKnown RBP17.81■□□□□ 0.44
USHBP1-205ENST00000595993 TMC7Q7Z402 723 aa17.81■□□□□ 0.44
USHBP1-205ENST00000595993 ABI1Q8IZP0 508 aa17.81■□□□□ 0.44
USHBP1-205ENST00000595993 CASP10Q92851 521 aa17.81■□□□□ 0.44
USHBP1-205ENST00000595993 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
USHBP1-205ENST00000595993 PCDHB6Q9Y5E3 794 aa17.81■□□□□ 0.44
USHBP1-205ENST00000595993 IGKV6-21A0A0C4DH24 114 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 STBD1O95210 358 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 BAG4O95429 457 aaKnown RBP17.8■□□□□ 0.44
USHBP1-205ENST00000595993 AVPR2P30518 371 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 TXKP42681 527 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 ITIH3Q06033 890 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 ORC2Q13416 577 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-205ENST00000595993 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
USHBP1-205ENST00000595993 NCAPH2Q6IBW4 605 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 LLGL2Q6P1M3 1020 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 C4orf32Q8N8J7 132 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 NECTIN4Q96NY8 510 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 MRPL9Q9BYD2 267 aaKnown RBP17.8■□□□□ 0.44
USHBP1-205ENST00000595993 NIFKQ9BYG3 293 aaKnown RBP17.8■□□□□ 0.44
USHBP1-205ENST00000595993 ADAM7Q9H2U9 754 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 TTC12Q9H892 705 aaPredicted RBP17.8■□□□□ 0.44
USHBP1-205ENST00000595993 DACT1Q9NYF0 836 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 IRAK3Q9Y616 596 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 DENND4AQ7Z401 1863 aa17.8■□□□□ 0.44
USHBP1-205ENST00000595993 ARID2Q68CP9 1835 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 ZFHX2Q9C0A1 2572 aaPredicted RBP17.79■□□□□ 0.44
USHBP1-205ENST00000595993 VPS37CA5D8V6 355 aaPredicted RBP17.79■□□□□ 0.44
USHBP1-205ENST00000595993 CLASP2O75122 1294 aaKnown RBP17.79■□□□□ 0.44
USHBP1-205ENST00000595993 OR52Z1P0C646 297 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 SYT1P21579 422 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 NUBP1P53384 320 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 DRP2Q13474 957 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 TPRNQ4KMQ1 711 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 HELQQ8TDG4 1101 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 POMKQ9H5K3 350 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 CHST12Q9NRB3 414 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 WRAP73Q9P2S5 460 aaPredicted RBP17.79■□□□□ 0.44
USHBP1-205ENST00000595993 CDH22Q9UJ99 828 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 PCDHA12Q9UN75 941 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 NR2E1Q9Y466 385 aa17.79■□□□□ 0.44
USHBP1-205ENST00000595993 VPS13AQ96RL7 3174 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 TMEM150BA6NC51 233 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 POTEMA6NI47 508 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 FGFR4P22455 802 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 PHKA2P46019 1235 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 BCAR1P56945 870 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 CDC42EP1Q00587 391 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 TBC1D8BQ0IIM8 1120 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 EPHA7Q15375 998 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms