RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 TCHHQ07283 1943 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 A0A1W2PQ27 194 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 A0A1W2PQ64 194 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 A0A1W2PQD8 194 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 CCDC169A6NNP5 214 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 SOX1O00570 391 aaPredicted RBP15.86■□□□□ 0.13
LIG1-208ENST00000595758 POLR2DO15514 142 aaKnown RBP15.86■□□□□ 0.13
LIG1-208ENST00000595758 ERLIN2O94905 339 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 UPP2O95045 317 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 PLS3P13797 630 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 NPTX2P47972 431 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 RABGGTBP53611 331 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
LIG1-208ENST00000595758 NCBP1Q09161 790 aaKnown RBP15.86■□□□□ 0.13
LIG1-208ENST00000595758 GIT2Q14161 759 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 TPRNQ4KMQ1 711 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 FAM117BQ6P1L5 589 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 SLC24A5Q71RS6 500 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 TOP1MTQ969P6 601 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 PYM1Q9BRP8 204 aaKnown RBP15.86■□□□□ 0.13
LIG1-208ENST00000595758 DACT1Q9NYF0 836 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 ODF2LQ9ULJ1 636 aa15.86■□□□□ 0.13
LIG1-208ENST00000595758 PIN4Q9Y237 131 aaKnown RBP15.86■□□□□ 0.13
LIG1-208ENST00000595758 MICAL3Q7RTP6 2002 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 A0A1B0GVL5 298 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 MYMKA6NI61 221 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 C9IYK1 514 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 TBCAO75347 108 aaKnown RBP15.85■□□□□ 0.13
LIG1-208ENST00000595758 FAM13AO94988 1023 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 GJB5O95377 273 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 PFKFB1P16118 471 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 IBSPP21815 317 aaPredicted RBP15.85■□□□□ 0.13
LIG1-208ENST00000595758 PBX2P40425 430 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 EFNA5P52803 228 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 SMTNP53814 917 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 RAB30Q15771 203 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 SPIRE2Q8WWL2 714 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 KIFC3Q9BVG8 833 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 ZHX3Q9H4I2 956 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 KMT5AQ9NQR1 393 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 AGPAT5Q9NUQ2 364 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 PRMT7Q9NVM4 692 aaPredicted RBP15.85■□□□□ 0.13
LIG1-208ENST00000595758 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
LIG1-208ENST00000595758 LARSQ9P2J5 1176 aaKnown RBP15.85■□□□□ 0.13
LIG1-208ENST00000595758 MSRAQ9UJ68 235 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 PCDHA11Q9Y5I1 949 aa15.85■□□□□ 0.13
LIG1-208ENST00000595758 GOLGA6L4A6NEF3 574 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 TLL1O43897 1013 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 TSPAN1O60635 241 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 STAG3L1P0CL83 205 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 LIG1P18858 919 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 AXLP30530 894 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 HOXA11P31270 313 aaPredicted RBP15.84■□□□□ 0.13
LIG1-208ENST00000595758 SARSP49591 514 aaKnown RBP15.84■□□□□ 0.13
LIG1-208ENST00000595758 FAM189BP81408 668 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 MAPK6Q16659 721 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 AMHR2Q16671 573 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 TWF2Q6IBS0 349 aaKnown RBP15.84■□□□□ 0.13
LIG1-208ENST00000595758 DYMQ7RTS9 669 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 NPAS4Q8IUM7 802 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 MYCT1Q8N699 235 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 FSIP1Q8NA03 581 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 DDX12PQ92771 950 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 LRCH3Q96II8 777 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 RAD9AQ99638 391 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 NTPCRQ9BSD7 190 aaKnown RBP15.84■□□□□ 0.13
LIG1-208ENST00000595758 PBX4Q9BYU1 374 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 LRRC27Q9C0I9 530 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 TNMDQ9H2S6 317 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 FZD8Q9H461 694 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 MAGEF1Q9HAY2 307 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 PARVGQ9HBI0 331 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 KBTBD4Q9NVX7 518 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 LRFN2Q9ULH4 789 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 HPSEQ9Y251 543 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 ADGRA3Q8IWK6 1321 aa15.84■□□□□ 0.13
LIG1-208ENST00000595758 FAM237AA0A1B0GTK4 181 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 K7ERI5 159 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 SLC16A4O15374 487 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 PRKCBP05771 671 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 MYOGP15173 224 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 DNAJB2P25686 324 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 ZNF131P52739 623 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 AMPD3Q01432 767 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 FAM187BQ17R55 369 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 CSPP1Q1MSJ5 1256 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 CEP57L1Q8IYX8 460 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 MRPS27Q92552 414 aaKnown RBP15.83■□□□□ 0.12
LIG1-208ENST00000595758 STAMQ92783 540 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 PRIMPOLQ96LW4 560 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 CCDC113Q9H0I3 377 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 ARHGAP28Q9P2N2 729 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 INSL6Q9Y581 213 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 PCDHB7Q9Y5E2 793 aa15.83■□□□□ 0.12
LIG1-208ENST00000595758 TTC3P53804 2025 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 A0A0U1RQF3 1178 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 ACKR2O00590 384 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 B4GALT5O43286 388 aa15.82■□□□□ 0.12
LIG1-208ENST00000595758 SLFN14P0C7P3 912 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms