RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 C4orf32Q8N8J7 132 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 RNF149Q8NC42 400 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 RNF169Q8NCN4 708 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 IL27Q8NEV9 243 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.53□□□□□ -1.36
SSX4B-201ENST00000595235 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 ASAP3Q8TDY4 903 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 PIGOQ8TEQ8 1089 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 PRPF31Q8WWY3 499 aaKnown RBP6.53□□□□□ -1.36
SSX4B-201ENST00000595235 PSPC1Q8WXF1 523 aaKnown RBP6.53□□□□□ -1.36
SSX4B-201ENST00000595235 LPPQ93052 612 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 TBC1D32Q96NH3 1257 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 JPH2Q9BR39 696 aaPredicted RBP6.53□□□□□ -1.36
SSX4B-201ENST00000595235 TMEM117Q9H0C3 514 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 AGPAT5Q9NUQ2 364 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 PIN4Q9Y237 131 aaKnown RBP6.53□□□□□ -1.36
SSX4B-201ENST00000595235 PPME1Q9Y570 386 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 STK24Q9Y6E0 443 aa6.53□□□□□ -1.36
SSX4B-201ENST00000595235 H3BQ06 376 aaPredicted RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 HOXA2O43364 376 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 USO1O60763 962 aaKnown RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 TBX10O75333 385 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 FGF18O76093 207 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 SRGAP2CP0DJJ0 459 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 IL9P15248 144 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 LAG3P18627 525 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 GLRA2P23416 452 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 U2AF2P26368 475 aaKnown RBP eCLIP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 GJB2P29033 226 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 LTBRP36941 435 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 PHKA2P46019 1235 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 CDC42EP1Q00587 391 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 DLX2Q07687 328 aaPredicted RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 ORC2Q13416 577 aaPredicted RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 GNL2Q13823 731 aaKnown RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 CAPSQ13938 189 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 ECM1Q16610 540 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 CTC1Q2NKJ3 1217 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 LEXMQ3ZCV2 418 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 UBXN11Q5T124 520 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 TWF2Q6IBS0 349 aaKnown RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 EP400NLQ6ZTU2 488 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 CATSPER4Q7RTX7 472 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 SRGAP1Q7Z6B7 1085 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 THNSL1Q8IYQ7 743 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 ABI1Q8IZP0 508 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 LRRC43Q8N309 656 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 PDCD7Q8N8D1 485 aaKnown RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 TCP11Q8WWU5 503 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 PABPC5Q96DU9 382 aaKnown RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 TRAIPQ9BWF2 469 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 INO80BQ9C086 356 aaPredicted RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 POLR3FQ9H1D9 316 aaPredicted RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 UPF2Q9HAU5 1272 aaKnown RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 TUFT1Q9NNX1 390 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 GPRC5CQ9NQ84 441 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 CHST12Q9NRB3 414 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 ANKEF1Q9NU02 776 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 FAM105AQ9NUU6 356 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 CLDND1Q9NY35 253 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 DACT1Q9NYF0 836 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 NOL7Q9UMY1 257 aaKnown RBP6.52□□□□□ -1.37
SSX4B-201ENST00000595235 PCDHB6Q9Y5E3 794 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 PCDHB12Q9Y5F1 795 aa6.52□□□□□ -1.37
SSX4B-201ENST00000595235 TDRD15B5MCY1 1934 aaKnown RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 PP2D1A8MPX8 630 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 FSCN2O14926 492 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 B4GALT5O43286 388 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 B4GALT3O60512 393 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 TSPAN1O60635 241 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 DGAT1O75907 488 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 GLP2RO95838 553 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 EOMESO95936 686 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 RPA1P27694 616 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 HOXA11P31270 313 aaPredicted RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 ARL2P36404 184 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 NRIP1P48552 1158 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 TRAPPC10P48553 1259 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 AFF1P51825 1210 aaKnown RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 PTENP60484 403 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 ERVFC1P60507 584 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 RBM10P98175 930 aaKnown RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 MBTD1Q05BQ5 628 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 PTGDRQ13258 359 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 CLUL1Q15846 466 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 IL17AQ16552 155 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 AMHR2Q16671 573 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 PTCRAQ6ISU1 281 aaPredicted RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 KCNT2Q6UVM3 1135 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 MAEAQ7L5Y9 396 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 TMEM173Q86WV6 379 aaPredicted RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 EXOC8Q8IYI6 725 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 BSNDQ8WZ55 320 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 MRPS27Q92552 414 aaKnown RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 KHSRPQ92945 711 aaKnown RBP eCLIP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 CPB2Q96IY4 423 aa6.51□□□□□ -1.37
SSX4B-201ENST00000595235 CCDC43Q96MW1 224 aaKnown RBP6.51□□□□□ -1.37
SSX4B-201ENST00000595235 ZNF558Q96NG5 402 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms