RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 B4GALT3O60512 393 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 CTSAP10619 480 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 VCPP55072 806 aaKnown RBP17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 NPEPPSP55786 919 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 NOMO2Q5JPE7 1267 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 PLA2G4FQ68DD2 849 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 TWF2Q6IBS0 349 aaKnown RBP17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 KRT25Q7Z3Z0 450 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 MRPL10Q7Z7H8 261 aaKnown RBP17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 RHPN2Q8IUC4 686 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 ZNF579Q8NAF0 562 aaKnown RBP17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 SLC22A17Q8WUG5 538 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 FAM20AQ96MK3 541 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 NECTIN4Q96NY8 510 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 JPH2Q9BR39 696 aaPredicted RBP17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 VN1R3Q9BXE9 311 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 CYP26B1Q9NR63 512 aa17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 WRAP73Q9P2S5 460 aaPredicted RBP17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 PIN4Q9Y237 131 aaKnown RBP17.84■□□□□ 0.45
GTF2F1-203ENST00000594213 USP34Q70CQ2 3546 aa17.83■□□□□ 0.45
GTF2F1-203ENST00000594213 C2CD4DB7Z1M9 353 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 CPLX1O14810 134 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 ZC3H11AO75152 810 aaKnown RBP eCLIP17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 AVPR2P30518 371 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 HOXA11P31270 313 aaPredicted RBP17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 QARSP47897 775 aaKnown RBP17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 RAB27AP51159 221 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 LONRF3Q496Y0 759 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 PPP4R3AQ6IN85 833 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 CES5AQ6NT32 575 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 AGMOQ6ZNB7 445 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 CATSPER4Q7RTX7 472 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 AUTS2Q8WXX7 1259 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 HAS1Q92839 578 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 PHF20Q9BVI0 1012 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 DHX33Q9H6R0 707 aaKnown RBP17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 KCNJ14Q9UNX9 436 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 NR2E1Q9Y466 385 aa17.83■□□□□ 0.44
GTF2F1-203ENST00000594213 SP100P23497 879 aaPredicted RBP17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 MTHFRP42898 656 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 SLC11A1P49279 550 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 BMS1Q14692 1282 aaKnown RBP17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 LETM2Q2VYF4 491 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 KANK3Q6NY19 840 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 ZNF280BQ86YH2 543 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 C12orf76Q8N812 135 aaPredicted RBP17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 KREMEN2Q8NCW0 462 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 RIPOR3Q96MK2 946 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 NLRP4Q96MN2 994 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 MINDY3Q9H8M7 445 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 AGPAT5Q9NUQ2 364 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 DNAJB4Q9UDY4 337 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 PPME1Q9Y570 386 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 PCDHB2Q9Y5E7 798 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 COL4A3BPQ9Y5P4 624 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 WDR81Q562E7 1941 aa17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 ZFHX2Q9C0A1 2572 aaPredicted RBP17.82■□□□□ 0.44
GTF2F1-203ENST00000594213 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 LILRB3O75022 631 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 PDGFBP01127 241 aaPredicted RBP17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 P4HBP07237 508 aaKnown RBP17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 WEE2P0C1S8 567 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 EPCAMP16422 314 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 AFF1P51825 1210 aaKnown RBP17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 STK3Q13188 491 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 GIT2Q14161 759 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 UBXN11Q5T124 520 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 KIAA1841Q6NSI8 718 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 SRGAP1Q7Z6B7 1085 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 FEZF2Q8TBJ5 459 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 PRPF31Q8WWY3 499 aaKnown RBP17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 DZANK1Q9NVP4 752 aa17.81■□□□□ 0.44
GTF2F1-203ENST00000594213 TBX3O15119 743 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 DDHD2O94830 711 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 BRD1O95696 1058 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 GCFC2P16383 781 aaKnown RBP17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 SPIRE1Q08AE8 756 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 SCRN1Q12765 414 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 EPHA7Q15375 998 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 RARS2Q5T160 578 aaKnown RBP17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 NEK8Q86SG6 692 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 C4orf19Q8IY42 314 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 UBALD2Q8IYN6 164 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 ZDHHC14Q8IZN3 488 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 OXER1Q8TDS5 423 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 TMEM143Q96AN5 459 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 PGBD4Q96DM1 585 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 CEP170P1Q96L14 293 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 TSHZ2Q9NRE2 1034 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 GJB4Q9NTQ9 266 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 PDRG1Q9NUG6 133 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 SORCS3Q9UPU3 1222 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 INPP5FQ9Y2H2 1132 aa17.8■□□□□ 0.44
GTF2F1-203ENST00000594213 DKC1O60832 514 aaKnown RBP eCLIP17.79■□□□□ 0.44
GTF2F1-203ENST00000594213 RFC5P40937 340 aa17.79■□□□□ 0.44
GTF2F1-203ENST00000594213 LAMTOR4Q0VGL1 99 aa17.79■□□□□ 0.44
GTF2F1-203ENST00000594213 EARS2Q5JPH6 523 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms