RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CASP4P49662 377 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 LAMTOR4Q0VGL1 99 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 MXD4Q14582 209 aaPredicted RBP16.64■□□□□ 0.25
VRK3-207ENST00000594092 MFSD10Q14728 455 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 MAN2A1Q16706 1144 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 KIAA0753Q2KHM9 967 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 SLC9A9Q8IVB4 645 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 METTL13Q8N6R0 699 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 LINC01465Q8N7H1 131 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 RETREG2Q8NC44 543 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 UPF3AQ9H1J1 476 aaKnown RBP16.64■□□□□ 0.25
VRK3-207ENST00000594092 RRAGDQ9NQL2 400 aaPredicted RBP16.64■□□□□ 0.25
VRK3-207ENST00000594092 HTTP42858 3142 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 HAS3O00219 553 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 PES1O00541 588 aaKnown RBP16.63■□□□□ 0.25
VRK3-207ENST00000594092 SLC16A3O15427 465 aaKnown RBP16.63■□□□□ 0.25
VRK3-207ENST00000594092 SFPQP23246 707 aaKnown RBP eCLIP16.63■□□□□ 0.25
VRK3-207ENST00000594092 PSEN2P49810 448 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 DNM2P50570 870 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 CYP2J2P51589 502 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 SNRPFP62306 86 aaKnown RBP16.63■□□□□ 0.25
VRK3-207ENST00000594092 UBXN1Q04323 297 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 LRMPQ12912 555 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 MYBPC2Q14324 1141 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 ARHGEF6Q15052 776 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 MARCH8Q5T0T0 291 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 MAP3K21Q5TCX8 1036 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 MTHFD1LQ6UB35 978 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 C12orf56Q8IXR9 622 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 PXYLP1Q8TE99 480 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 TMEM174Q8WUU8 243 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 EVPLQ92817 2033 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 ANKRD63C9JTQ0 380 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 GJB1P08034 283 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 SMIM10L2AP0DMW4 78 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 SMIM10L2BP0DMW5 78 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 RARBP10826 455 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 ARID5BQ14865 1188 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 VWA3BQ502W6 1294 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 CEP135Q66GS9 1140 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 FRMD5Q7Z6J6 570 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 RHPN2Q8IUC4 686 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 TRIM59Q8IWR1 403 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 TSKSQ9UJT2 592 aa16.63■□□□□ 0.25
VRK3-207ENST00000594092 RRN3P2A6NIE6 340 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 NRDCO43847 1150 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 ZNF500O60304 480 aaPredicted RBP16.62■□□□□ 0.25
VRK3-207ENST00000594092 PGK1P00558 417 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 SRGAP2CP0DJJ0 459 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 EPB41P11171 864 aaKnown RBP16.62■□□□□ 0.25
VRK3-207ENST00000594092 HSPA6P17066 643 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 CHMP4BP1P59074 171 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 NKX3-2P78367 333 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 PURAQ00577 322 aaKnown RBP16.62■□□□□ 0.25
VRK3-207ENST00000594092 MAP2K1Q02750 393 aaPredicted RBP16.62■□□□□ 0.25
VRK3-207ENST00000594092 CDCA2Q69YH5 1023 aaPredicted RBP16.62■□□□□ 0.25
VRK3-207ENST00000594092 ARMCX5Q6P1M9 558 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 RNF149Q8NC42 400 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 CBWD1Q9BRT8 395 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 NDST4Q9H3R1 872 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 TMEM134Q9H6X4 195 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 SETD4Q9NVD3 440 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 ARMCX3Q9UH62 379 aaPredicted RBP16.62■□□□□ 0.25
VRK3-207ENST00000594092 SIP14410 1827 aa16.62■□□□□ 0.25
VRK3-207ENST00000594092 KAT6AQ92794 2004 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 K7ERI5 159 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 ASAP2O43150 1006 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 ADSSP30520 456 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 PSMC2P35998 433 aaKnown RBP16.61■□□□□ 0.25
VRK3-207ENST00000594092 STRN3Q13033 797 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 TBX2Q13207 712 aaPredicted RBP16.61■□□□□ 0.25
VRK3-207ENST00000594092 GNASQ5JWF2 1037 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 SLC39A4Q6P5W5 647 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 PPP1R13LQ8WUF5 828 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 LMBR1Q8WVP7 490 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 MKNK1Q9BUB5 465 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 KATNAL1Q9BW62 490 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 PCIF1Q9H4Z3 704 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 SPC25Q9HBM1 224 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 ITIH6Q6UXX5 1313 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 PHLPP2Q6ZVD8 1323 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 KPNA6O60684 536 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 ADAMTS4O75173 837 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 TMOD1P28289 359 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 EFNA5P52803 228 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 PRMT2P55345 433 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 TFDP1Q14186 410 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 FAM186BQ8IYM0 893 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 BICD1Q96G01 975 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 BORCS6Q96GS4 357 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 METTL14Q9HCE5 456 aaKnown RBP16.61■□□□□ 0.25
VRK3-207ENST00000594092 XPNPEP3Q9NQH7 507 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 HSPBP1Q9NZL4 362 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 PYCARDQ9ULZ3 195 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 FRMD4BQ9Y2L6 1034 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 NRCAMQ92823 1304 aa16.61■□□□□ 0.25
VRK3-207ENST00000594092 A0A1W2PQC6 194 aa16.6■□□□□ 0.25
VRK3-207ENST00000594092 HNRNPDLO14979 420 aaKnown RBP16.6■□□□□ 0.25
VRK3-207ENST00000594092 EXOC3O60645 756 aa16.6■□□□□ 0.25
VRK3-207ENST00000594092 PPFIBP1Q86W92 1011 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms