RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SFPQP23246 707 aaKnown RBP eCLIP21.68■■□□□ 1.06
LSM4-203ENST00000593829 CAPSQ13938 189 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 AXDND1Q5T1B0 1012 aaPredicted RBP21.68■■□□□ 1.06
LSM4-203ENST00000593829 HERC6Q8IVU3 1022 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 MYOCDQ8IZQ8 938 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 KIFAP3Q92845 792 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 TSPYL2Q9H2G4 693 aaPredicted RBP21.68■■□□□ 1.06
LSM4-203ENST00000593829 BLOC1S4Q9NUP1 217 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 KCND2Q9NZV8 630 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 PCDHA7Q9UN72 937 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 PTENP60484 403 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 RRAGBQ5VZM2 374 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 LRRC15Q8TF66 581 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 LEO1Q8WVC0 666 aaPredicted RBP21.68■■□□□ 1.06
LSM4-203ENST00000593829 RAD54LQ92698 747 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 SPATA32Q96LK8 384 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 TIPINQ9BVW5 301 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 SCAND2PQ9GZW5 306 aaPredicted RBP21.68■■□□□ 1.06
LSM4-203ENST00000593829 STK17AQ9UEE5 414 aa21.68■■□□□ 1.06
LSM4-203ENST00000593829 MICAL3Q7RTP6 2002 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 DENND3A2RUS2 1198 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 FGFR4P22455 802 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 FXR1P51114 621 aaKnown RBP eCLIP21.67■■□□□ 1.06
LSM4-203ENST00000593829 CCDC73Q6ZRK6 1079 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 RTN4RL1Q86UN2 441 aaPredicted RBP21.67■■□□□ 1.06
LSM4-203ENST00000593829 LINC01599Q8WXQ3 324 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 LRCH3Q96II8 777 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 FUCA2Q9BTY2 467 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 TPM3P06753 285 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 GUCY2CP25092 1073 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 CATSPER4Q7RTX7 472 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 IFNLR1Q8IU57 520 aaPredicted RBP21.67■■□□□ 1.06
LSM4-203ENST00000593829 LARP4BQ92615 738 aaKnown RBP21.67■■□□□ 1.06
LSM4-203ENST00000593829 IFT74Q96LB3 600 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 ADAM2Q99965 735 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 NFKBIZQ9BYH8 718 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 POLD4Q9HCU8 107 aa21.67■■□□□ 1.06
LSM4-203ENST00000593829 LRRIQ4A6NIV6 560 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 MGEA5O60502 916 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 HIP1RO75146 1068 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 RABGGTBP53611 331 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 DHX8Q14562 1220 aaKnown RBP21.66■■□□□ 1.06
LSM4-203ENST00000593829 MCM6Q14566 821 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 PPP2R5AQ15172 486 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 SHC4Q6S5L8 630 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 TMCO2Q7Z6W1 182 aaPredicted RBP21.66■■□□□ 1.06
LSM4-203ENST00000593829 TOP1MTQ969P6 601 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 DRC1Q96MC2 740 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 ZBED2Q9BTP6 218 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 PBX4Q9BYU1 374 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 MINDY3Q9H8M7 445 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 GDPD2Q9HCC8 539 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 MSRAQ9UJ68 235 aa21.66■■□□□ 1.06
LSM4-203ENST00000593829 GJB5O95377 273 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 ZSCAN20P17040 1043 aaPredicted RBP21.65■■□□□ 1.06
LSM4-203ENST00000593829 DSC3Q14574 896 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 NOLC1Q14978 699 aaKnown RBP eCLIP21.65■■□□□ 1.069e-14■■■■■ 27.3
LSM4-203ENST00000593829 PCBP1Q15365 356 aaKnown RBP eCLIP21.65■■□□□ 1.06
LSM4-203ENST00000593829 RAB30Q15771 203 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 GPBP1Q86WP2 473 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 BSNDQ8WZ55 320 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 RGS18Q9NS28 235 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 C1orf112Q9NSG2 853 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 PCDHA11Q9Y5I1 949 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 ADCY5O95622 1261 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 PBX2P40425 430 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 NAMPTP43490 491 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 RAD51AP2Q09MP3 1159 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 FAM117BQ6P1L5 589 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 CHST12Q9NRB3 414 aa21.65■■□□□ 1.06
LSM4-203ENST00000593829 INO80B-WBP1J3KQ70 363 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 UPP2O95045 317 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 DNAJB2P25686 324 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 STAT6P42226 847 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 NAALADL2Q58DX5 795 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 ARSHQ5FYA8 562 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 SLC24A5Q71RS6 500 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 ZBTB8OSQ8IWT0 167 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 DAW1Q8N136 415 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 PDILTQ8N807 584 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 USP25Q9UHP3 1055 aa21.64■■□□□ 1.05
LSM4-203ENST00000593829 A0A087X0B3 334 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 TLL1O43897 1013 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 MBTD1Q05BQ5 628 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 MAPK7Q13164 816 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 CDCA2Q69YH5 1023 aaPredicted RBP21.63■■□□□ 1.05
LSM4-203ENST00000593829 GPR153Q6NV75 609 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 DEPTORQ8TB45 409 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 C2orf40Q9H1Z8 148 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 C17orf75Q9HAS0 396 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 DACT1Q9NYF0 836 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 ERLIN2O94905 339 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 SARSP49591 514 aaKnown RBP21.63■■□□□ 1.05
LSM4-203ENST00000593829 RESP18Q5W5W9 173 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 SV2BQ7L1I2 683 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 RAD9AQ99638 391 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 AGPAT5Q9NUQ2 364 aa21.63■■□□□ 1.05
LSM4-203ENST00000593829 RNF216Q9NWF9 866 aaPredicted RBP21.63■■□□□ 1.05
LSM4-203ENST00000593829 PIN4Q9Y237 131 aaKnown RBP21.63■■□□□ 1.05
LSM4-203ENST00000593829 PTPRSQ13332 1948 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms