RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PLCG1P19174 1290 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 RARRES1P49788 294 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 AMPD3Q01432 767 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 PTK7Q13308 1070 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 TMEM119Q4V9L6 283 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 TAF2Q6P1X5 1199 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 BMP8AQ7Z5Y6 402 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 SERINC5Q86VE9 423 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 ADHFE1Q8IWW8 467 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 METTL13Q8N6R0 699 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 TRIML1Q8N9V2 468 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 RETREG2Q8NC44 543 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 SLC7A3Q8WY07 619 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 PBXIP1Q96AQ6 731 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-219ENST00000592927 PCDHA2Q9Y5H9 948 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 ZNF318Q5VUA4 2279 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 E9PMD0 336 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 C22orf31O95567 290 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 EYA4O95677 639 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 TMOD1P28289 359 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 RFC5P40937 340 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 POLGP54098 1239 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-219ENST00000592927 NLRP12P59046 1061 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 BFSP2Q13515 415 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 PNOCQ13519 176 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 NAALADL2Q58DX5 795 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-219ENST00000592927 EFCAB12Q6NXP0 572 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 RUFY4Q6ZNE9 571 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 TMCO2Q7Z6W1 182 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-219ENST00000592927 RSPH3Q86UC2 560 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 CCDC155Q8N6L0 562 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 SPATA20Q8TB22 786 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 ATOH1Q92858 354 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-219ENST00000592927 ZBTB10Q96DT7 871 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 CTAGE1Q96RT6 745 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 CEP89Q96ST8 783 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 ZBED2Q9BTP6 218 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 FAM49AQ9H0Q0 323 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-219ENST00000592927 BHMT2Q9H2M3 363 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 KBTBD4Q9NVX7 518 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 FAM50BQ9Y247 325 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 ZDBF2Q9HCK1 2354 aa13.16□□□□□ -0.3
DDX39A-219ENST00000592927 ZFHX2Q9C0A1 2572 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-219ENST00000592927 WDR81Q562E7 1941 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 C5orf42Q9H799 3197 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 SMIM35A0A1B0GVV1 85 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 MAFO75444 373 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-219ENST00000592927 DGAT1O75907 488 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 KRT37O76014 449 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 RPLP2P05387 115 aaKnown RBP13.15□□□□□ -0.3
DDX39A-219ENST00000592927 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
DDX39A-219ENST00000592927 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 THPOP40225 353 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 SARSP49591 514 aaKnown RBP13.15□□□□□ -0.3
DDX39A-219ENST00000592927 DNM2P50570 870 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 DPYDQ12882 1025 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 PADI6Q6TGC4 694 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 KCNK18Q7Z418 384 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 SUGP1Q8IWZ8 645 aaKnown RBP13.15□□□□□ -0.3
DDX39A-219ENST00000592927 LRRC71Q8N4P6 559 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 LARP4BQ92615 738 aaKnown RBP13.15□□□□□ -0.3
DDX39A-219ENST00000592927 EDAQ92838 391 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 GSDMAQ96QA5 445 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 GTPBP4Q9BZE4 634 aaKnown RBP13.15□□□□□ -0.3
DDX39A-219ENST00000592927 NAT10Q9H0A0 1025 aaKnown RBP13.15□□□□□ -0.3
DDX39A-219ENST00000592927 DHX33Q9H6R0 707 aaKnown RBP13.15□□□□□ -0.3
DDX39A-219ENST00000592927 GRPEL1Q9HAV7 217 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 RMND1Q9NWS8 449 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 PCDHA5Q9Y5H7 936 aa13.15□□□□□ -0.3
DDX39A-219ENST00000592927 MYH9P35579 1960 aaKnown RBP13.14□□□□□ -0.31
DDX39A-219ENST00000592927 IGKV6-21A0A0C4DH24 114 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 GAS2O43903 313 aaKnown RBP13.14□□□□□ -0.31
DDX39A-219ENST00000592927 USO1O60763 962 aaKnown RBP13.14□□□□□ -0.31
DDX39A-219ENST00000592927 RFC2P35250 354 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 AFMP43652 599 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 ID4P47928 161 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 CLCN3P51790 818 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 ERVK-21P61565 698 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 EMC2Q15006 297 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 UVSSAQ2YD98 709 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 ANO6Q4KMQ2 910 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-219ENST00000592927 RNF135Q8IUD6 432 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 KIAA0319LQ8IZA0 1049 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 NME8Q8N427 588 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 SYT2Q8N9I0 419 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-219ENST00000592927 FAM200AQ8TCP9 573 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 DNAJB3Q8WWF6 145 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 DHX38Q92620 1227 aaKnown RBP13.14□□□□□ -0.31
DDX39A-219ENST00000592927 RAD54LQ92698 747 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 WNT8BQ93098 351 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 TGS1Q96RS0 853 aaKnown RBP13.14□□□□□ -0.31
DDX39A-219ENST00000592927 MAP7D2Q96T17 732 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms