RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 TMC5Q6UXY8 1006 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 DPP8Q6V1X1 898 aaPredicted RBP7.99□□□□□ -1.13
VMP1-215ENST00000592619 C11orf96Q7Z7L8 435 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 NBPF11Q86T75 865 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 GRAMD1CQ8IYS0 662 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 PAWRQ96IZ0 340 aaKnown RBP7.99□□□□□ -1.13
VMP1-215ENST00000592619 PKNOX2Q96KN3 472 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 MPHOSPH6Q99547 160 aaKnown RBP7.99□□□□□ -1.13
VMP1-215ENST00000592619 NOL10Q9BSC4 688 aaKnown RBP7.99□□□□□ -1.13
VMP1-215ENST00000592619 FAM204AQ9H8W3 233 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 ARHGAP20Q9P2F6 1191 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 IPPQ9Y573 584 aa7.99□□□□□ -1.13
VMP1-215ENST00000592619 HTRA2O43464 458 aaPredicted RBP7.98□□□□□ -1.13
VMP1-215ENST00000592619 IL18BPO95998 194 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 ZBED1O96006 694 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 MCAMP43121 646 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 IL13RA1P78552 427 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 PGS1Q32NB8 556 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 GAREM2Q75VX8 874 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 ZBTB34Q8NCN2 500 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 GREM2Q9H772 168 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 SYNPO2Q9UMS6 1093 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 LIMCH1Q9UPQ0 1083 aa7.98□□□□□ -1.13
VMP1-215ENST00000592619 TUSC2O75896 110 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 SEC24DO94855 1032 aaPredicted RBP7.97□□□□□ -1.13
VMP1-215ENST00000592619 CYP2C8P10632 490 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 RHCEP18577 417 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 XPAP23025 273 aaPredicted RBP7.97□□□□□ -1.13
VMP1-215ENST00000592619 GP2P55259 537 aaKnown RBP7.97□□□□□ -1.13
VMP1-215ENST00000592619 RHDQ02161 417 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 MAP3K12Q12852 859 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 LONRF3Q496Y0 759 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 OVCH2Q7RTZ1 564 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 ZSWIM9Q86XI8 627 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 DENND1CQ8IV53 801 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 PPP1R14CQ8TAE6 165 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 TMEM60Q9H2L4 133 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 ABCC8Q09428 1581 aa7.97□□□□□ -1.13
VMP1-215ENST00000592619 CCDC154A6NI56 674 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 A6NNZ2 444 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 APAF1O14727 1248 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 TPP1O14773 563 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 FXR1P51114 621 aaKnown RBP eCLIP7.96□□□□□ -1.14
VMP1-215ENST00000592619 NRG3P56975 720 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 CCT2P78371 535 aaKnown RBP7.96□□□□□ -1.14
VMP1-215ENST00000592619 KCNMB1Q16558 191 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 DGKDQ16760 1214 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 IL31Q6EBC2 164 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 KLHDC10Q6PID8 442 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 B3GNT8Q7Z7M8 397 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 GLB1L2Q8IW92 636 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 MARCH10Q8NA82 808 aaPredicted RBP7.96□□□□□ -1.14
VMP1-215ENST00000592619 OR5AN1Q8NGI8 311 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 NRG4Q8WWG1 115 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 KCND1Q9NSA2 647 aa7.96□□□□□ -1.14
VMP1-215ENST00000592619 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.96□□□□□ -1.14
VMP1-215ENST00000592619 URB2Q14146 1524 aaKnown RBP7.95□□□□□ -1.14
VMP1-215ENST00000592619 A0A0A6YYK5 440 aaPredicted RBP7.95□□□□□ -1.14
VMP1-215ENST00000592619 FAM227AF5H4B4 570 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 BIN1O00499 593 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 CHGBP05060 677 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 IFIT2P09913 472 aaKnown RBP7.95□□□□□ -1.14
VMP1-215ENST00000592619 CD83Q01151 205 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 MORC3Q14149 939 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 GJC2Q5T442 439 aaPredicted RBP7.95□□□□□ -1.14
VMP1-215ENST00000592619 LDHDQ86WU2 507 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 CAMKK1Q8N5S9 505 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 GLB1L3Q8NCI6 653 aaPredicted RBP7.95□□□□□ -1.14
VMP1-215ENST00000592619 HDAC10Q969S8 669 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 WRNIP1Q96S55 665 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 FDXACB1Q9BRP7 624 aaPredicted RBP7.95□□□□□ -1.14
VMP1-215ENST00000592619 TACO1Q9BSH4 297 aaKnown RBP7.95□□□□□ -1.14
VMP1-215ENST00000592619 SOX7Q9BT81 388 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 ADI1Q9BV57 179 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 OSBPL6Q9BZF3 934 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 ZFP69BQ9UJL9 534 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 PCDHA5Q9Y5H7 936 aa7.95□□□□□ -1.14
VMP1-215ENST00000592619 DNMBPQ6XZF7 1577 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 PEX10O60683 326 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 LDHAP00338 332 aaKnown RBP7.94□□□□□ -1.14
VMP1-215ENST00000592619 GSPT1P15170 499 aaKnown RBP7.94□□□□□ -1.14
VMP1-215ENST00000592619 IL12RB1P42701 662 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 HTR3AP46098 478 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 GLRBP48167 497 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 NEK3P51956 506 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 ITGA1P56199 1179 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 ZNF280AP59817 542 aaPredicted RBP7.94□□□□□ -1.14
VMP1-215ENST00000592619 SRSF3P84103 164 aaKnown RBP7.94□□□□□ -1.14
VMP1-215ENST00000592619 PPP3CAQ08209 521 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 MGAT2Q10469 447 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 GRAMD4Q6IC98 578 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 KIAA0319LQ8IZA0 1049 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 PPP1R35Q8TAP8 253 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 SMARCC2Q8TAQ2 1214 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 CLIC6Q96NY7 704 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 STRBPQ96SI9 672 aaKnown RBP7.94□□□□□ -1.14
VMP1-215ENST00000592619 KRTAP4-7Q9BYR0 210 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 RBM12Q9NTZ6 932 aaKnown RBP7.94□□□□□ -1.14
VMP1-215ENST00000592619 FBXO10Q9UK96 956 aa7.94□□□□□ -1.14
VMP1-215ENST00000592619 INTUQ9ULD6 942 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms