RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 NSUN6Q8TEA1 469 aaKnown RBP10.28□□□□□ -0.76
SMARCA4-218ENST00000592158 IWS1Q96ST2 819 aa10.28□□□□□ -0.76
SMARCA4-218ENST00000592158 NT5C3AQ9H0P0 336 aa10.28□□□□□ -0.76
SMARCA4-218ENST00000592158 ELAC1Q9H777 363 aaKnown RBP10.28□□□□□ -0.76
SMARCA4-218ENST00000592158 TLR7Q9NYK1 1049 aaKnown RBP10.28□□□□□ -0.76
SMARCA4-218ENST00000592158 HSPBP1Q9NZL4 362 aa10.28□□□□□ -0.76
SMARCA4-218ENST00000592158 TUBE1Q9UJT0 475 aa10.28□□□□□ -0.76
SMARCA4-218ENST00000592158 MTCL1Q9Y4B5 1905 aaKnown RBP10.28□□□□□ -0.76
SMARCA4-218ENST00000592158 PCNX1Q96RV3 2341 aa10.28□□□□□ -0.76
SMARCA4-218ENST00000592158 ABCA7Q8IZY2 2146 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 A0A1B0GTL3 188 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 CCDC194A0A1B0GVG4 234 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 TRABD2BA6NFA1 517 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 HOXA2O43364 376 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 RHOBTB1O94844 696 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 SSBP05455 408 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 ADSSP30520 456 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 IL12RB1P42701 662 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 MAPK8P45983 427 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 SP2Q02086 613 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 UBAP2LQ14157 1087 aaKnown RBP10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 PDXDC2PQ6P474 469 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 LRRC69Q6ZNQ3 347 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 Q6ZS52 159 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 ITPRIPQ8IWB1 547 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 SSH3Q8TE77 659 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 DNASE1L2Q92874 299 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 FGF13Q92913 245 aa10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 FAM49AQ9H0Q0 323 aaPredicted RBP10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 RBM12Q9NTZ6 932 aaKnown RBP10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 DBNLQ9UJU6 430 aaKnown RBP10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 ZNF215Q9UL58 517 aaPredicted RBP10.27□□□□□ -0.77
SMARCA4-218ENST00000592158 CCDC163A0A0D9SF12 145 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 NOP56O00567 594 aaKnown RBP10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 PDE6AP16499 860 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 CR2P20023 1033 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 UBA1P22314 1058 aaKnown RBP10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 FAM189BP81408 668 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 SLC9C2Q5TAH2 1124 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 CTR9Q6PD62 1173 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 WBP1Q96G27 269 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 IGSF21Q96ID5 467 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 PLA2G2FQ9BZM2 168 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 STK24Q9Y6E0 443 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 ZNF532Q9HCE3 1301 aa10.26□□□□□ -0.77
SMARCA4-218ENST00000592158 PI4KAP42356 2102 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 PAPLNO95428 1278 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 GLUD1P00367 558 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 FTH1P19P0C7X4 201 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 EIF2AK2P19525 551 aaKnown RBP10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 SLC16A2P36021 539 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 PPFIA1Q13136 1202 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 HNRNPDQ14103 355 aaKnown RBP10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 LRRC32Q14392 662 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 UTP14CQ5TAP6 766 aaKnown RBP10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 KCNV1Q6PIU1 500 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 BCL7CQ8WUZ0 217 aaPredicted RBP10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 TBC1D5Q92609 795 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 ZBTB10Q96DT7 871 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 DDRGK1Q96HY6 314 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 RMDN3Q96TC7 470 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 CELF4Q9BZC1 486 aaKnown RBP10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 PRKD2Q9BZL6 878 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 COL20A1Q9P218 1284 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 THADAQ6YHU6 1953 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 NF1P21359 2839 aa10.25□□□□□ -0.77
SMARCA4-218ENST00000592158 DOCK5Q9H7D0 1870 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 KIF26AQ9ULI4 1882 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 MBLAC1A4D2B0 266 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 RPLP2P05387 115 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 ADH1AP07327 375 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 NR3C2P08235 984 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 SPATA31D3P0C874 917 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 RLBP1P12271 317 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 ZNF76P36508 570 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 EIF2S3P41091 472 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 NTHL1P78549 312 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 LMAN2Q12907 356 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 TRIP6Q15654 476 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 GRIK4Q16099 956 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 ARHGEF16Q5VV41 709 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 SPATA31D4Q6ZUB0 917 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 GRASPQ7Z6J2 395 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 ZNF710Q8N1W2 664 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 SYTL5Q8TDW5 730 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 EAF2Q96CJ1 260 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 VN1R3Q9BXE9 311 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 ZDHHC7Q9NXF8 308 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 NOP58Q9Y2X3 529 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 PIAS3Q9Y6X2 628 aa10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 SPTBN1Q01082 2364 aaKnown RBP10.24□□□□□ -0.77
SMARCA4-218ENST00000592158 ZC3H11AO75152 810 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCA4-218ENST00000592158 RPS6KA5O75582 802 aa10.23□□□□□ -0.77
SMARCA4-218ENST00000592158 MBD4O95243 580 aa10.23□□□□□ -0.77
SMARCA4-218ENST00000592158 KRT10P13645 584 aa10.23□□□□□ -0.77
SMARCA4-218ENST00000592158 CCNE1P24864 410 aa10.23□□□□□ -0.77
SMARCA4-218ENST00000592158 HNRNPUQ00839 825 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCA4-218ENST00000592158 SEMA3FQ13275 785 aa10.23□□□□□ -0.77
SMARCA4-218ENST00000592158 MARCH8Q5T0T0 291 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms