RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 NFASCO94856 1347 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 MYPNQ86TC9 1320 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 LRRIQ3A6PVS8 624 aaPredicted RBP17.13■□□□□ 0.33
MBD1-227ENST00000592060 P4HA2O15460 535 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 N4BP1O75113 896 aaKnown RBP17.13■□□□□ 0.33
MBD1-227ENST00000592060 H2AFZP0C0S5 128 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 MYBL2P10244 700 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 EPC2Q52LR7 807 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 FAM102BQ5T8I3 360 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 PHLDB3Q6NSJ2 640 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 CCNI2Q6ZMN8 369 aaPredicted RBP17.13■□□□□ 0.33
MBD1-227ENST00000592060 H2AFVQ71UI9 128 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 TMEM161BQ8NDZ6 487 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 LRRC1Q9BTT6 524 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 PACSIN2Q9UNF0 486 aaPredicted RBP17.13■□□□□ 0.33
MBD1-227ENST00000592060 CES2O00748 559 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 NCANO14594 1321 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 ZMYND10O75800 440 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 ADRB2P07550 413 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 KIF22Q14807 665 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 IFI16Q16666 785 aaKnown RBP17.12■□□□□ 0.33
MBD1-227ENST00000592060 CFAP221Q4G0U5 840 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 CCDC70Q6NSX1 233 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 FMNL3Q8IVF7 1028 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 MAP4K3Q8IVH8 894 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.12■□□□□ 0.33
MBD1-227ENST00000592060 TPCN2Q8NHX9 752 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 U2AF1L4Q8WU68 220 aaKnown RBP17.12■□□□□ 0.33
MBD1-227ENST00000592060 HDAC7Q8WUI4 952 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 BSNDQ8WZ55 320 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 RBM12Q9NTZ6 932 aaKnown RBP17.12■□□□□ 0.33
MBD1-227ENST00000592060 TMOD4Q9NZQ9 345 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 TELO2Q9Y4R8 837 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 SBF1O95248 1867 aa17.12■□□□□ 0.33
MBD1-227ENST00000592060 PMM2O15305 246 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 POLR3GO15318 223 aaPredicted RBP17.11■□□□□ 0.33
MBD1-227ENST00000592060 EIF3JO75822 258 aaKnown RBP17.11■□□□□ 0.33
MBD1-227ENST00000592060 ZBTB48P10074 688 aaPredicted RBP17.11■□□□□ 0.33
MBD1-227ENST00000592060 LMNB1P20700 586 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 NPTX2P47972 431 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 SH3D19Q5HYK7 790 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 VIPAS39Q9H9C1 493 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 DMGDHQ9UI17 866 aaKnown RBP17.11■□□□□ 0.33
MBD1-227ENST00000592060 TBX20Q9UMR3 447 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 USP20Q9Y2K6 914 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 STAM2O75886 525 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 KIF4AO95239 1232 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 ADSSP30520 456 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 SLFN11Q7Z7L1 901 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 ARHGEF19Q8IW93 802 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 GSPT2Q8IYD1 628 aaKnown RBP17.11■□□□□ 0.33
MBD1-227ENST00000592060 GPC2Q8N158 579 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 AENQ8WTP8 325 aaKnown RBP17.11■□□□□ 0.33
MBD1-227ENST00000592060 SPIRE2Q8WWL2 714 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 ATP6V0A1Q93050 837 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 ZCCHC17Q9NP64 241 aaKnown RBP17.11■□□□□ 0.33
MBD1-227ENST00000592060 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 EXOC7Q9UPT5 735 aa17.11■□□□□ 0.33
MBD1-227ENST00000592060 SIP14410 1827 aa17.1■□□□□ 0.33
MBD1-227ENST00000592060 PFASO15067 1338 aa17.1■□□□□ 0.33
MBD1-227ENST00000592060 ANKRD63C9JTQ0 380 aa17.1■□□□□ 0.33
MBD1-227ENST00000592060 GALCP54803 685 aa17.1■□□□□ 0.33
MBD1-227ENST00000592060 OTUD6AQ7L8S5 288 aa17.1■□□□□ 0.33
MBD1-227ENST00000592060 TRMT1LQ7Z2T5 733 aaKnown RBP17.1■□□□□ 0.33
MBD1-227ENST00000592060 GLYCTKQ8IVS8 523 aa17.1■□□□□ 0.33
MBD1-227ENST00000592060 KIFAP3Q92845 792 aa17.1■□□□□ 0.33
MBD1-227ENST00000592060 CDHR1Q96JP9 859 aa17.1■□□□□ 0.33
MBD1-227ENST00000592060 KIFC3Q9BVG8 833 aa17.1■□□□□ 0.33
MBD1-227ENST00000592060 JPH1Q9HDC5 661 aaPredicted RBP17.1■□□□□ 0.33
MBD1-227ENST00000592060 MYH9P35579 1960 aaKnown RBP17.1■□□□□ 0.33
MBD1-227ENST00000592060 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
MBD1-227ENST00000592060 SPATA31C2B4DYI2 1134 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 DKC1O60832 514 aaKnown RBP eCLIP17.09■□□□□ 0.33
MBD1-227ENST00000592060 PSAPP07602 524 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 TNFRSF8P28908 595 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.33
MBD1-227ENST00000592060 GCLMP48507 274 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
MBD1-227ENST00000592060 ARHGAP44Q17R89 818 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
MBD1-227ENST00000592060 VTI1AQ96AJ9 217 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 NTPCRQ9BSD7 190 aaKnown RBP17.09■□□□□ 0.33
MBD1-227ENST00000592060 GOLPH3Q9H4A6 298 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 C17orf75Q9HAS0 396 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 SLC9A2Q9UBY0 812 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 STXBP5LQ9Y2K9 1186 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 SNCAIPQ9Y6H5 919 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 LRRC37A2A6NM11 1700 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 IGSF9BQ9UPX0 1349 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 CCDC169A6NNP5 214 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 FOXN3O00409 490 aaPredicted RBP17.09■□□□□ 0.33
MBD1-227ENST00000592060 LRRN2O75325 713 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 USP2O75604 605 aaPredicted RBP17.09■□□□□ 0.33
MBD1-227ENST00000592060 TMEM253P0C7T8 217 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 NOP2P46087 812 aaKnown RBP17.09■□□□□ 0.33
MBD1-227ENST00000592060 DNA2P51530 1060 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms