RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 WDR81Q562E7 1941 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 SPTBN2O15020 2390 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 PRPF3O43395 683 aaKnown RBP11.53□□□□□ -0.56
SDF2-209ENST00000591903 NARSO43776 548 aaKnown RBP11.53□□□□□ -0.56
SDF2-209ENST00000591903 ATG7O95352 703 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 ARP10275 920 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 ATXN1P54253 815 aaKnown RBP11.53□□□□□ -0.56
SDF2-209ENST00000591903 BCAR1P56945 870 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 LMNB2Q03252 620 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
SDF2-209ENST00000591903 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 ELMSAN1Q6PJG2 1045 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 WASF1Q92558 559 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 RTKNQ9BST9 563 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 EMILIN2Q9BXX0 1053 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 RHOBTB2Q9BYZ6 727 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 GLT8D2Q9H1C3 349 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 KCNH7Q9NS40 1196 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 DLGAP2Q9P1A6 1054 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 KIF3AQ9Y496 699 aa11.53□□□□□ -0.56
SDF2-209ENST00000591903 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
SDF2-209ENST00000591903 MTCL1Q9Y4B5 1905 aaKnown RBP11.52□□□□□ -0.56
SDF2-209ENST00000591903 IGKV6D-21A0A0A0MT36 114 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 A0A0U1RQF3 1178 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 GPR32O75388 356 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 PLEKHA8P1O95397 391 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 DEXIO95424 95 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 ADD1P35611 737 aaKnown RBP11.52□□□□□ -0.57
SDF2-209ENST00000591903 AKAP17AQ02040 695 aaKnown RBP11.52□□□□□ -0.57
SDF2-209ENST00000591903 CLLU1OSQ5K130 101 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 SPECC1Q5M775 1068 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 HSCBQ8IWL3 235 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 CMASQ8NFW8 434 aaPredicted RBP11.52□□□□□ -0.57
SDF2-209ENST00000591903 CCDC12Q8WUD4 166 aaPredicted RBP11.52□□□□□ -0.57
SDF2-209ENST00000591903 PIBF1Q8WXW3 757 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 MXRA8Q9BRK3 442 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 SH3GLB2Q9NR46 395 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 DACT1Q9NYF0 836 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 EPS15L1Q9UBC2 864 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 DPP7Q9UHL4 492 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 NAP1L2Q9ULW6 460 aaPredicted RBP11.52□□□□□ -0.57
SDF2-209ENST00000591903 CA14Q9ULX7 337 aa11.52□□□□□ -0.57
SDF2-209ENST00000591903 ESYT2A0FGR8 921 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 NT5C1B-RDH14C9J2C7 533 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 BACH1O14867 736 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 CD2BP2O95400 341 aaKnown RBP11.51□□□□□ -0.57
SDF2-209ENST00000591903 LARGE1O95461 756 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 DCNP07585 359 aaKnown RBP11.51□□□□□ -0.57
SDF2-209ENST00000591903 ADRB1P08588 477 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 RXRAP19793 462 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 GBP2P32456 591 aaPredicted RBP11.51□□□□□ -0.57
SDF2-209ENST00000591903 CLCN4P51793 760 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 CCT2P78371 535 aaKnown RBP11.51□□□□□ -0.57
SDF2-209ENST00000591903 SSRP1Q08945 709 aaKnown RBP11.51□□□□□ -0.57
SDF2-209ENST00000591903 BECN1Q14457 450 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 PFKFB3Q16875 520 aaPredicted RBP11.51□□□□□ -0.57
SDF2-209ENST00000591903 GALNT17Q6IS24 598 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 SLC44A3Q8N4M1 653 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 RNF169Q8NCN4 708 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 NSUN7Q8NE18 718 aaKnown RBP11.51□□□□□ -0.57
SDF2-209ENST00000591903 PJA1Q8NG27 643 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 HELQQ8TDG4 1101 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 AUTS2Q8WXX7 1259 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 IGSF21Q96ID5 467 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 SHDQ96IW2 340 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 ARHGEF3Q9NR81 526 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 FBXO4Q9UKT5 387 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 PCDHA6Q9UN73 950 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 CEP131Q9UPN4 1083 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 PCDHGA2Q9Y5H1 932 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 PCDHA8Q9Y5H6 950 aa11.51□□□□□ -0.57
SDF2-209ENST00000591903 MYH15Q9Y2K3 1946 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 BAHCC1Q9P281 2608 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 MAGEB2O15479 319 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 ZC3H11AO75152 810 aaKnown RBP eCLIP11.5□□□□□ -0.57
SDF2-209ENST00000591903 C22orf31O95567 290 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 VTNP04004 478 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 XBP1P17861 261 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 EIF4BP23588 611 aaKnown RBP11.5□□□□□ -0.57
SDF2-209ENST00000591903 KLRC2P26717 231 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 TMOD1P28289 359 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 PTPN14Q15678 1187 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 PDXDC2PQ6P474 469 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 ZNF598Q86UK7 904 aaKnown RBP11.5□□□□□ -0.57
SDF2-209ENST00000591903 METTL13Q8N6R0 699 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 CCDC148Q8NFR7 591 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 GPR152Q8TDT2 470 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 BBXQ8WY36 941 aaPredicted RBP11.5□□□□□ -0.57
SDF2-209ENST00000591903 MAP7D2Q96T17 732 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 PPP1R16BQ96T49 567 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 NCOA5Q9HCD5 579 aaKnown RBP11.5□□□□□ -0.57
SDF2-209ENST00000591903 WDR6Q9NNW5 1121 aaKnown RBP11.5□□□□□ -0.57
SDF2-209ENST00000591903 ZNF302Q9NR11 478 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 SLC2A4RGQ9NR83 387 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 BARHL2Q9NY43 387 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 CHD6Q8TD26 2715 aa11.5□□□□□ -0.57
SDF2-209ENST00000591903 ZBTB42B2RXF5 422 aa11.49□□□□□ -0.57
SDF2-209ENST00000591903 N4BP1O75113 896 aaKnown RBP11.49□□□□□ -0.57
SDF2-209ENST00000591903 CTDNEP1O95476 244 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms