RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 RNF149Q8NC42 400 aa17.19■□□□□ 0.34
GCDH-208ENST00000588905 SNX29Q8TEQ0 813 aa17.19■□□□□ 0.34
GCDH-208ENST00000588905 TRAIPQ9BWF2 469 aa17.19■□□□□ 0.34
GCDH-208ENST00000588905 TMEM117Q9H0C3 514 aa17.19■□□□□ 0.34
GCDH-208ENST00000588905 LMAN2LQ9H0V9 348 aa17.19■□□□□ 0.34
GCDH-208ENST00000588905 PIN4Q9Y237 131 aaKnown RBP17.19■□□□□ 0.34
GCDH-208ENST00000588905 USO1O60763 962 aaKnown RBP17.18■□□□□ 0.34
GCDH-208ENST00000588905 BMP15O95972 392 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 PHKA2P46019 1235 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 POU5F1BQ06416 359 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 TFDP1Q14186 410 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 PTPAQ15257 358 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 TWF2Q6IBS0 349 aaKnown RBP17.18■□□□□ 0.34
GCDH-208ENST00000588905 ZNF598Q86UK7 904 aaKnown RBP17.18■□□□□ 0.34
GCDH-208ENST00000588905 RNF169Q8NCN4 708 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 KHSRPQ92945 711 aaKnown RBP eCLIP17.18■□□□□ 0.34
GCDH-208ENST00000588905 P2RX5Q93086 422 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 ZSCAN16Q9H4T2 348 aaPredicted RBP17.18■□□□□ 0.34
GCDH-208ENST00000588905 MINDY3Q9H8M7 445 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
GCDH-208ENST00000588905 RNF19AQ9NV58 838 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 COG5Q9UP83 839 aa17.18■□□□□ 0.34
GCDH-208ENST00000588905 GRM6O15303 877 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 SKIP12755 728 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 PTENP60484 403 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 GRIN1Q05586 938 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 PCBP1Q15365 356 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■■■■ 36.4
GCDH-208ENST00000588905 TIGD5Q53EQ6 642 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 SPOUT1Q5T280 376 aaKnown RBP17.17■□□□□ 0.34
GCDH-208ENST00000588905 PADI6Q6TGC4 694 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 MAEAQ7L5Y9 396 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 ABI1Q8IZP0 508 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 MCPH1Q8NEM0 835 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 ASAP3Q8TDY4 903 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 CASD1Q96PB1 797 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 AAASQ9NRG9 546 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 AGPAT5Q9NUQ2 364 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 TYW1Q9NV66 732 aaKnown RBP17.17■□□□□ 0.34
GCDH-208ENST00000588905 PLAGL2Q9UPG8 496 aa17.17■□□□□ 0.34
GCDH-208ENST00000588905 ARHGEF35A5YM69 484 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 ATF7P17544 494 aaPredicted RBP17.16■□□□□ 0.34
GCDH-208ENST00000588905 CYP11B2P19099 503 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 COL9A1P20849 921 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 GLRA2P23416 452 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 RAB27AP51159 221 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 KCNK18Q7Z418 384 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 IFNLR1Q8IU57 520 aaPredicted RBP17.16■□□□□ 0.34
GCDH-208ENST00000588905 KLHL23Q8NBE8 558 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 HLA-CQ95604 372 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 PNMA5Q96PV4 448 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 POLR3FQ9H1D9 316 aaPredicted RBP17.16■□□□□ 0.34
GCDH-208ENST00000588905 BHMT2Q9H2M3 363 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 ALG13Q9NP73 1137 aaKnown RBP17.16■□□□□ 0.34
GCDH-208ENST00000588905 GPRC5CQ9NQ84 441 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 DNM3Q9UQ16 869 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 PCDHB12Q9Y5F1 795 aa17.16■□□□□ 0.34
GCDH-208ENST00000588905 E9PMD0 336 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 ZNF623O75123 536 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 ITGB1P05556 798 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 HOXA11P31270 313 aaPredicted RBP17.15■□□□□ 0.34
GCDH-208ENST00000588905 CEBPZQ03701 1054 aaKnown RBP17.15■□□□□ 0.34
GCDH-208ENST00000588905 CAPSQ13938 189 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 CLLU1OSQ5K130 101 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 HYIQ5T013 277 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 SPPL3Q8TCT6 385 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 AK8Q96MA6 479 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 USP28Q96RU2 1077 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 NFKBIZQ9BYH8 718 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 CWH43Q9H720 699 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 CD320Q9NPF0 282 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 FAM105AQ9NUU6 356 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 PLXNA4Q9HCM2 1894 aa17.15■□□□□ 0.34
GCDH-208ENST00000588905 INO80B-WBP1J3KQ70 363 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 ERLIN2O94905 339 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 EYA4O95677 639 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 PDIA4P13667 645 aaKnown RBP17.14■□□□□ 0.33
GCDH-208ENST00000588905 LAG3P18627 525 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 MARCKSP29966 332 aaPredicted RBP17.14■□□□□ 0.33
GCDH-208ENST00000588905 AXLP30530 894 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
GCDH-208ENST00000588905 PKP1Q13835 747 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 ZRSR1Q15695 479 aaKnown RBP17.14■□□□□ 0.33
GCDH-208ENST00000588905 CSPP1Q1MSJ5 1256 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 AAK1Q2M2I8 961 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
GCDH-208ENST00000588905 LRRC55Q6ZSA7 311 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 LRRC43Q8N309 656 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 COLGALT1Q8NBJ5 622 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 HELQQ8TDG4 1101 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
GCDH-208ENST00000588905 RSPH1Q8WYR4 309 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 PLIN2Q99541 437 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 NSUN3Q9H649 340 aaKnown RBP17.14■□□□□ 0.33
GCDH-208ENST00000588905 POLD4Q9HCU8 107 aa17.14■□□□□ 0.33
GCDH-208ENST00000588905 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.13■□□□□ 0.33
GCDH-208ENST00000588905 ZSCAN22P10073 491 aaPredicted RBP17.13■□□□□ 0.33
GCDH-208ENST00000588905 LONP1P36776 959 aaKnown RBP17.13■□□□□ 0.33
GCDH-208ENST00000588905 MBTD1Q05BQ5 628 aa17.13■□□□□ 0.33
GCDH-208ENST00000588905 TMEM119Q4V9L6 283 aa17.13■□□□□ 0.33
GCDH-208ENST00000588905 TCEAL5Q5H9L2 206 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms