RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 LAD1O00515 517 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 ZNF623O75123 536 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 MED24O75448 989 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 FGF18O76093 207 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 DNAJB1P25685 340 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 PUS10Q3MIT2 529 aaKnown RBP16.07■□□□□ 0.16
DDX39A-208ENST00000588692 IFNLR1Q8IU57 520 aaPredicted RBP16.07■□□□□ 0.16
DDX39A-208ENST00000588692 THNSL1Q8IYQ7 743 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 MCPH1Q8NEM0 835 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 HELQQ8TDG4 1101 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 ZNF558Q96NG5 402 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 RAB34Q9BZG1 259 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 STK24Q9Y6E0 443 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 BDP1A6H8Y1 2624 aa16.07■□□□□ 0.16
DDX39A-208ENST00000588692 ERLIN2O94905 339 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 GJB2P29033 226 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 ARL2P36404 184 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 PTENP60484 403 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 PLCB3Q01970 1234 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 PDE12Q6L8Q7 609 aaKnown RBP16.06■□□□□ 0.16
DDX39A-208ENST00000588692 LRRC55Q6ZSA7 311 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 C4orf32Q8N8J7 132 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 PGBD4Q96DM1 585 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 MINDY3Q9H8M7 445 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 TLR9Q9NR96 1032 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 CLDND1Q9NY35 253 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 HCSTQ9UBK5 93 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 LZTS1Q9Y250 596 aa16.06■□□□□ 0.16
DDX39A-208ENST00000588692 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-208ENST00000588692 FSD2A1L4K1 749 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 USO1O60763 962 aaKnown RBP16.05■□□□□ 0.16
DDX39A-208ENST00000588692 AXLP30530 894 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 PRPHP41219 470 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 TOB1P50616 345 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-208ENST00000588692 HYAL1Q12794 435 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 PTGDRQ13258 359 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 CAPSQ13938 189 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 PDIA5Q14554 519 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 NBR1Q14596 966 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 CTC1Q2NKJ3 1217 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 KCNT2Q6UVM3 1135 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 GLB1LQ6UWU2 654 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 CCDC51Q96ER9 411 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 LRWD1Q9UFC0 647 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 PUF60Q9UHX1 559 aaKnown RBP16.05■□□□□ 0.16
DDX39A-208ENST00000588692 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 MUC3AQ02505 3323 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 CNTNAP2Q9UHC6 1331 aa16.05■□□□□ 0.16
DDX39A-208ENST00000588692 H3BQV1 296 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 CSPG5O95196 566 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 HOXA11P31270 313 aaPredicted RBP16.04■□□□□ 0.16
DDX39A-208ENST00000588692 IRS1P35568 1242 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 NCBP1Q09161 790 aaKnown RBP16.04■□□□□ 0.16
DDX39A-208ENST00000588692 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 IGSF22Q8N9C0 903 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 CNNM3Q8NE01 707 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 MRPS27Q92552 414 aaKnown RBP16.04■□□□□ 0.16
DDX39A-208ENST00000588692 POLR3FQ9H1D9 316 aaPredicted RBP16.04■□□□□ 0.16
DDX39A-208ENST00000588692 FAM50BQ9Y247 325 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 PCDHB6Q9Y5E3 794 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 PCDHB2Q9Y5E7 798 aa16.04■□□□□ 0.16
DDX39A-208ENST00000588692 ARHGEF35A5YM69 484 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 INO80B-WBP1J3KQ70 363 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 TSPAN1O60635 241 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 GLRA2P23416 452 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 CCT6AP40227 531 aaKnown RBP16.03■□□□□ 0.16
DDX39A-208ENST00000588692 KRT17Q04695 432 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 PTCRAQ6ISU1 281 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-208ENST00000588692 NOTUMQ6P988 496 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 EP400NLQ6ZTU2 488 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 MRPL10Q7Z7H8 261 aaKnown RBP16.03■□□□□ 0.16
DDX39A-208ENST00000588692 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-208ENST00000588692 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.03■□□□□ 0.16
DDX39A-208ENST00000588692 SPG21Q9NZD8 308 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 H3BQ06 376 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-208ENST00000588692 LTBRP36941 435 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 ALDH7A1P49419 539 aaKnown RBP16.03■□□□□ 0.16
DDX39A-208ENST00000588692 MBTD1Q05BQ5 628 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 NOMO2Q5JPE7 1267 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 PADI6Q6TGC4 694 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 ADGRD2Q7Z7M1 963 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 SLC39A11Q8N1S5 342 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 EFHBQ8N7U6 833 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 MICAL1Q8TDZ2 1067 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 LPPQ93052 612 aa16.03■□□□□ 0.16
DDX39A-208ENST00000588692 NECAB3Q96P71 396 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-208ENST00000588692 A0A087WWV3 80 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 GRXCR2A6NFK2 248 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 FSCN2O14926 492 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 OFD1O75665 1012 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.15
DDX39A-208ENST00000588692 ADAM15Q13444 863 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 UBXN11Q5T124 520 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 DTHD1Q6ZMT9 781 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 URGCPQ8TCY9 931 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms