RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 ANTXR1Q9H6X2 564 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 ARMT1Q9H993 441 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 POLMQ9NP87 494 aaPredicted RBP8.09□□□□□ -1.11
TPM4-210ENST00000588507 RBM12Q9NTZ6 932 aaKnown RBP8.09□□□□□ -1.11
TPM4-210ENST00000588507 RNF19AQ9NV58 838 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 EVLQ9UI08 416 aaPredicted RBP8.09□□□□□ -1.11
TPM4-210ENST00000588507 APOBEC2Q9Y235 224 aaKnown RBP8.09□□□□□ -1.11
TPM4-210ENST00000588507 PCDHB9Q9Y5E1 797 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 HEMK1Q9Y5R4 338 aaPredicted RBP8.09□□□□□ -1.11
TPM4-210ENST00000588507 GOLGA4Q13439 2230 aaKnown RBP8.09□□□□□ -1.12
TPM4-210ENST00000588507 CACNA1DQ01668 2161 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 BAZ2AQ9UIF9 1905 aaKnown RBP8.08□□□□□ -1.12
TPM4-210ENST00000588507 MBLAC1A4D2B0 266 aaPredicted RBP8.08□□□□□ -1.12
TPM4-210ENST00000588507 TERTO14746 1132 aaKnown RBP8.08□□□□□ -1.12
TPM4-210ENST00000588507 SSBP05455 408 aaKnown RBP eCLIP8.08□□□□□ -1.12
TPM4-210ENST00000588507 ADH1AP07327 375 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 UBA1P22314 1058 aaKnown RBP8.08□□□□□ -1.12
TPM4-210ENST00000588507 TMEM62Q0P6H9 643 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 PPFIA1Q13136 1202 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 DGKKQ5KSL6 1271 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 SLC9C2Q5TAH2 1124 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 SYDE2Q5VT97 1194 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 ARHGEF16Q5VV41 709 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 CTR9Q6PD62 1173 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 TOGARAM2Q6ZUX3 1019 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 TRIM50Q86XT4 487 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 ZNF280BQ86YH2 543 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 MED8Q96G25 268 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 NUSAP1Q9BXS6 441 aaKnown RBP8.08□□□□□ -1.12
TPM4-210ENST00000588507 PLA2G2FQ9BZM2 168 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 PLEKHA4Q9H4M7 779 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 BRD9Q9H8M2 597 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 MRPL17Q9NRX2 175 aaKnown RBP8.08□□□□□ -1.12
TPM4-210ENST00000588507 STK39Q9UEW8 545 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 PIAS3Q9Y6X2 628 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 NUP205Q92621 2012 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 ITPR2Q14571 2701 aa8.08□□□□□ -1.12
TPM4-210ENST00000588507 KDM3AQ9Y4C1 1321 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 RPS6KA5O75582 802 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 NR3C2P08235 984 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 SPATA31D3P0C874 917 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 TGFB3P10600 412 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 PDE6AP16499 860 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 CCNE1P24864 410 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 CXADRP78310 365 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 SP2Q02086 613 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 G3BP1Q13283 466 aaKnown RBP eCLIP8.07□□□□□ -1.125e-7■□□□□ 11.1
TPM4-210ENST00000588507 KARSQ15046 597 aaKnown RBP8.07□□□□□ -1.12
TPM4-210ENST00000588507 GRIK4Q16099 956 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 UTP14CQ5TAP6 766 aaKnown RBP8.07□□□□□ -1.12
TPM4-210ENST00000588507 SPATA31D4Q6ZUB0 917 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 CYP2U1Q7Z449 544 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 GRASPQ7Z6J2 395 aaPredicted RBP8.07□□□□□ -1.12
TPM4-210ENST00000588507 PLEKHM2Q8IWE5 1019 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 ZNF444Q8N0Y2 327 aaPredicted RBP8.07□□□□□ -1.12
TPM4-210ENST00000588507 PDCD7Q8N8D1 485 aaKnown RBP8.07□□□□□ -1.12
TPM4-210ENST00000588507 SYTL5Q8TDW5 730 aaPredicted RBP8.07□□□□□ -1.12
TPM4-210ENST00000588507 PSMG3-AS1Q96PY0 264 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 DNAJC2Q99543 621 aaKnown RBP8.07□□□□□ -1.12
TPM4-210ENST00000588507 MRPL9Q9BYD2 267 aaKnown RBP8.07□□□□□ -1.12
TPM4-210ENST00000588507 FAM117AQ9C073 453 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 MAF1Q9H063 256 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 SEPT3Q9UH03 358 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 ST3GAL5Q9UNP4 418 aa8.07□□□□□ -1.12
TPM4-210ENST00000588507 ZNF532Q9HCE3 1301 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 NAV3Q8IVL0 2385 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 PTPRBP23467 1997 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 GPR182O15218 404 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 SRGAP3O43295 1099 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 EXTL3O43909 919 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 B4GALT3O60512 393 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 OPHN1O60890 802 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 ZC3H11AO75152 810 aaKnown RBP eCLIP8.06□□□□□ -1.12
TPM4-210ENST00000588507 MYF5P13349 255 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 ENGP17813 658 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 EIF2AK2P19525 551 aaKnown RBP8.06□□□□□ -1.12
TPM4-210ENST00000588507 SLC16A2P36021 539 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 KRT76Q01546 638 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 RALBP1Q15311 655 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 PKDCCQ504Y2 493 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 TRIM61Q5EBN2 209 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 MARCH8Q5T0T0 291 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 AGMOQ6ZNB7 445 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 WWC1Q8IX03 1113 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 STK11IPQ8N1F8 1099 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 BCL7CQ8WUZ0 217 aaPredicted RBP8.06□□□□□ -1.12
TPM4-210ENST00000588507 IRF7Q92985 503 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 VN1R3Q9BXE9 311 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 TRPV5Q9NQA5 729 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 SSX2IPQ9Y2D8 614 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 NOC2LQ9Y3T9 749 aaKnown RBP8.06□□□□□ -1.12
TPM4-210ENST00000588507 FPGT-TNNI3KV9GXZ4 949 aa8.06□□□□□ -1.12
TPM4-210ENST00000588507 SPTBN1Q01082 2364 aaKnown RBP8.06□□□□□ -1.12
TPM4-210ENST00000588507 DOCK6Q96HP0 2047 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 E9PAM4 449 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 DCLK1O15075 740 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 TEX28O15482 410 aa8.05□□□□□ -1.12
TPM4-210ENST00000588507 GAS2O43903 313 aaKnown RBP8.05□□□□□ -1.12
TPM4-210ENST00000588507 C1RP00736 705 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms