RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 AK8Q96MA6 479 aa21.3■■□□□ 1
CIRBP-217ENST00000588230 MINDY3Q9H8M7 445 aa21.3■■□□□ 1
CIRBP-217ENST00000588230 RWDD3Q9Y3V2 267 aa21.3■■□□□ 1
CIRBP-217ENST00000588230 CLIC4Q9Y696 253 aa21.3■■□□□ 1
CIRBP-217ENST00000588230 E9PMD0 336 aa21.29■■□□□ 1
CIRBP-217ENST00000588230 INO80B-WBP1J3KQ70 363 aa21.29■■□□□ 1
CIRBP-217ENST00000588230 EYA4O95677 639 aa21.29■■□□□ 1
CIRBP-217ENST00000588230 CTNNB1P35222 781 aa21.29■■□□□ 1
CIRBP-217ENST00000588230 POU5F1BQ06416 359 aa21.29■■□□□ 1
CIRBP-217ENST00000588230 CAPSQ13938 189 aa21.29■■□□□ 1
CIRBP-217ENST00000588230 SKIV2LQ15477 1246 aaKnown RBP21.29■■□□□ 1
CIRBP-217ENST00000588230 ECHDC2Q86YB7 292 aa21.29■■□□□ 1
CIRBP-217ENST00000588230 SPRYD3Q8NCJ5 442 aa21.29■■□□□ 1
CIRBP-217ENST00000588230 BDP1A6H8Y1 2624 aa21.28■■□□□ 1
CIRBP-217ENST00000588230 FNDC1Q4ZHG4 1894 aaPredicted RBP21.28■■□□□ 1
CIRBP-217ENST00000588230 A0A0U1RQF3 1178 aa21.28■■□□□ 1
CIRBP-217ENST00000588230 TBKBP1A7MCY6 615 aa21.28■■□□□ 1
CIRBP-217ENST00000588230 HOXA2O43364 376 aa21.28■■□□□ 1
CIRBP-217ENST00000588230 ERLIN2O94905 339 aa21.28■■□□□ 1
CIRBP-217ENST00000588230 PDIA4P13667 645 aaKnown RBP21.28■■□□□ 1
CIRBP-217ENST00000588230 UBA7P41226 1012 aa21.28■■□□□ 1
CIRBP-217ENST00000588230 PCBP1Q15365 356 aaKnown RBP eCLIP21.28■■□□□ 1
CIRBP-217ENST00000588230 NT5C3AQ9H0P0 336 aa21.28■■□□□ 1
CIRBP-217ENST00000588230 AGPAT5Q9NUQ2 364 aa21.28■■□□□ 1
CIRBP-217ENST00000588230 LRRIQ4A6NIV6 560 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 EOMESO95936 686 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 RB1P06400 928 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 FGFR1P11362 822 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 SKIP12755 728 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 LONP1P36776 959 aaKnown RBP21.27■■□□□ 1
CIRBP-217ENST00000588230 CEBPZQ03701 1054 aaKnown RBP21.27■■□□□ 1
CIRBP-217ENST00000588230 NCBP1Q09161 790 aaKnown RBP21.27■■□□□ 1
CIRBP-217ENST00000588230 HYIQ5T013 277 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 CABP7Q86V35 215 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 IFNLR1Q8IU57 520 aaPredicted RBP21.27■■□□□ 1
CIRBP-217ENST00000588230 ABI1Q8IZP0 508 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 KCTD17Q8N5Z5 321 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 SYMPKQ92797 1274 aaKnown RBP21.27■■□□□ 1
CIRBP-217ENST00000588230 PLIN2Q99541 437 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 TRAIPQ9BWF2 469 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 RNF19AQ9NV58 838 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 COG5Q9UP83 839 aa21.27■■□□□ 1
CIRBP-217ENST00000588230 GRM6O15303 877 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 SLC26A4O43511 780 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 BMP1P13497 986 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 RAB27AP51159 221 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 KCNQ1P51787 676 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 PTPAQ15257 358 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 KCNK18Q7Z418 384 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 HLA-CQ95604 372 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 CALML4Q96GE6 196 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 PNMA5Q96PV4 448 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 C11orf84Q9BUA3 381 aaPredicted RBP21.26■□□□□ 0.99
CIRBP-217ENST00000588230 NFKBIZQ9BYH8 718 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 TMEM117Q9H0C3 514 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 FAM105AQ9NUU6 356 aa21.26■□□□□ 0.99
CIRBP-217ENST00000588230 SSBP05455 408 aaKnown RBP eCLIP21.25■□□□□ 0.99
CIRBP-217ENST00000588230 MARCKSP29966 332 aaPredicted RBP21.25■□□□□ 0.99
CIRBP-217ENST00000588230 HOXA11P31270 313 aaPredicted RBP21.25■□□□□ 0.99
CIRBP-217ENST00000588230 MBTD1Q05BQ5 628 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 CAMK1Q14012 370 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 COL19A1Q14993 1142 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 PPP2R5AQ15172 486 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 PTPROQ16827 1216 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 SPOUT1Q5T280 376 aaKnown RBP21.25■□□□□ 0.99
CIRBP-217ENST00000588230 FOXD4L5Q5VV16 416 aaPredicted RBP21.25■□□□□ 0.99
CIRBP-217ENST00000588230 ZNF598Q86UK7 904 aaKnown RBP21.25■□□□□ 0.99
CIRBP-217ENST00000588230 ZBTB8OSQ8IWT0 167 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 RASSF8Q8NHQ8 419 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 FOXD4L4Q8WXT5 416 aaPredicted RBP21.25■□□□□ 0.99
CIRBP-217ENST00000588230 KIFAP3Q92845 792 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 IFT74Q96LB3 600 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 PLVAPQ9BX97 442 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 POLD4Q9HCU8 107 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 HCSTQ9UBK5 93 aa21.25■□□□□ 0.99
CIRBP-217ENST00000588230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.24■□□□□ 0.99
CIRBP-217ENST00000588230 TSPAN1O60635 241 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 AXLP30530 894 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 GRIN1Q05586 938 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 TIGD5Q53EQ6 642 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 DEPTORQ8TB45 409 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 ADAMTS19Q8TE59 1207 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 BSNDQ8WZ55 320 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 P2RX5Q93086 422 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 USP28Q96RU2 1077 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 C2orf40Q9H1Z8 148 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 PCDHB2Q9Y5E7 798 aa21.24■□□□□ 0.99
CIRBP-217ENST00000588230 ZNF623O75123 536 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 ATF7P17544 494 aaPredicted RBP21.23■□□□□ 0.99
CIRBP-217ENST00000588230 DNAJB1P25685 340 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 NAMPTP43490 491 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 TMEM119Q4V9L6 283 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 TCEAL5Q5H9L2 206 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 RINT1Q6NUQ1 792 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 NOTUMQ6P988 496 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 PGBD4Q96DM1 585 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 ZNF396Q96N95 335 aaPredicted RBP21.23■□□□□ 0.99
CIRBP-217ENST00000588230 CASD1Q96PB1 797 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 RUSC1Q9BVN2 902 aa21.23■□□□□ 0.99
CIRBP-217ENST00000588230 LMAN2LQ9H0V9 348 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms