RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 GLRA2P23416 452 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 PPM1AP35813 382 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 UBE3AQ05086 875 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 CAPSQ13938 189 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 PAN2Q504Q3 1202 aaKnown RBP11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 HYIQ5T013 277 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 ZBTB8OSQ8IWT0 167 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 MICALL1Q8N3F8 863 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 KIFAP3Q92845 792 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 PPP2R3CQ969Q6 453 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 PRIMPOLQ96LW4 560 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 TIPINQ9BVW5 301 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 ZSCAN16Q9H4T2 348 aaPredicted RBP11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 FAM105AQ9NUU6 356 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 DDX19AQ9NUU7 478 aaKnown RBP11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 KCNG1Q9UIX4 513 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 KIAA1024Q9UPX6 916 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 PHLPP2Q6ZVD8 1323 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 CNTNAP2Q9UHC6 1331 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 MYH11P35749 1972 aa11.54□□□□□ -0.56
SMARCA4-209ENST00000586122 INO80B-WBP1J3KQ70 363 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 NCK2O43639 380 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 CSDE1O75534 798 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 NAMPTP43490 491 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 CCDC85BQ15834 202 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 SPOUT1Q5T280 376 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 FAM102BQ5T8I3 360 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 CDCA2Q69YH5 1023 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 NOTUMQ6P988 496 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 GLB1LQ6UWU2 654 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 HACE1Q8IYU2 909 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 ASAP3Q8TDY4 903 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 PPM1EQ8WY54 764 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 CDK5RAP3Q96JB5 506 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 IFT74Q96LB3 600 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 BHMT2Q9H2M3 363 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 NSUN3Q9H649 340 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 UBN1Q9NPG3 1134 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 PRMT7Q9NVM4 692 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 KCND2Q9NZV8 630 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 MORC2Q9Y6X9 1032 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 ZMYM2Q9UBW7 1377 aa11.53□□□□□ -0.56
SMARCA4-209ENST00000586122 CUL9Q8IWT3 2517 aa11.52□□□□□ -0.56
SMARCA4-209ENST00000586122 FSD2A1L4K1 749 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 VWA3AA6NCI4 1184 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 LRRIQ4A6NIV6 560 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 TSPAN1O60635 241 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 HSP90AA1P07900 732 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 FGFR1P11362 822 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 ATF7P17544 494 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 IBSPP21815 317 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 LONP1P36776 959 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 GATMP50440 423 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 EFNA5P52803 228 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 MBTD1Q05BQ5 628 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 SKIV2LQ15477 1246 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 IL17AQ16552 155 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 FAM187BQ17R55 369 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 PDE12Q6L8Q7 609 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 MRPL10Q7Z7H8 261 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 RNF169Q8NCN4 708 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 SYMPKQ92797 1274 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 CASD1Q96PB1 797 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 MINDY3Q9H8M7 445 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 C17orf75Q9HAS0 396 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 RNF19AQ9NV58 838 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 TYW1Q9NV66 732 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 PLAGL2Q9UPG8 496 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 LZTS1Q9Y250 596 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 PCDHB2Q9Y5E7 798 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 ATG2AQ2TAZ0 1938 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 MYH15Q9Y2K3 1946 aa11.52□□□□□ -0.57
SMARCA4-209ENST00000586122 PLXNA4Q9HCM2 1894 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 RBAK-RBAKDNI3L0D1 243 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 STX6O43752 255 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 NCLP19338 710 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 HOXA11P31270 313 aaPredicted RBP11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 UBA7P41226 1012 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 MRPS5P82675 430 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 RESTQ13127 1097 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 SF3A1Q15459 793 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 ECM1Q16610 540 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 MAPK6Q16659 721 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 TJAP1Q5JTD0 557 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 CLLU1OSQ5K130 101 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 KLHL23Q8NBE8 558 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 COLGALT1Q8NBJ5 622 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 DEPTORQ8TB45 409 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 URGCPQ8TCY9 931 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 HLA-CQ95604 372 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 CALML4Q96GE6 196 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 DRC1Q96MC2 740 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 ZNF558Q96NG5 402 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 MMTAG2Q9BU76 263 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 CSRNP2Q9H175 543 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 CWH43Q9H720 699 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 GPRC5CQ9NQ84 441 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 KANSL3Q9P2N6 904 aa11.51□□□□□ -0.57
SMARCA4-209ENST00000586122 MTMR6Q9Y217 621 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms