RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 GALTP07902 379 aa22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 SRGAP2CP0DJJ0 459 aa22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 SFPQP23246 707 aaKnown RBP eCLIP22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 AVPR2P30518 371 aa22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 PSMC5P62195 406 aa22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 TCF15Q12870 199 aa22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 NONOQ15233 471 aaKnown RBP eCLIP22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 BCL7CQ8WUZ0 217 aaPredicted RBP22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 MRPL9Q9BYD2 267 aaKnown RBP22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 INO80BQ9C086 356 aaPredicted RBP22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 SMOC2Q9H3U7 446 aa22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 BMP2KQ9NSY1 1161 aaPredicted RBP22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 FAM105AQ9NUU6 356 aa22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 FAM86C1Q9NVL1 165 aa22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 DNAJB4Q9UDY4 337 aa22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 ZNF318Q5VUA4 2279 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 EPCAMP16422 314 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 PTPN5P54829 565 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 GLB1LQ6UWU2 654 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 ZNF280BQ86YH2 543 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 TMEM143Q96AN5 459 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 IGSF21Q96ID5 467 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 MBOAT7Q96N66 472 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 GJB4Q9NTQ9 266 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 TBC1D13Q9NVG8 400 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 LIMD1Q9UGP4 676 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 NR2E1Q9Y466 385 aa22.55■■□□□ 1.2
CLPTM1-204ENST00000585961 SSBP05455 408 aaKnown RBP eCLIP22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 AFF1P51825 1210 aaKnown RBP22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 ZNF410Q86VK4 478 aa22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 PRPF31Q8WWY3 499 aaKnown RBP22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 CEP170P1Q96L14 293 aa22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 ZBP1Q9H171 429 aa22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 CYP26B1Q9NR63 512 aa22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 PDRG1Q9NUG6 133 aa22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 WRAP73Q9P2S5 460 aaPredicted RBP22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 PCDHB2Q9Y5E7 798 aa22.54■■□□□ 1.2
CLPTM1-204ENST00000585961 MARCH6O60337 910 aa22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 ASGR2P07307 311 aa22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 SKIP12755 728 aa22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 QARSP47897 775 aaKnown RBP22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 SLC11A1P49279 550 aa22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 ITIH3Q06033 890 aa22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 CPLX2Q6PUV4 134 aaKnown RBP22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 DDX53Q86TM3 631 aaKnown RBP22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 DAGLBQ8NCG7 672 aa22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 RIPOR3Q96MK2 946 aa22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 TRAIPQ9BWF2 469 aa22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 IFT122Q9HBG6 1241 aa22.53■■□□□ 1.2
CLPTM1-204ENST00000585961 ZBTB39O15060 712 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 B4GALT3O60512 393 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 DDHD2O94830 711 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 BRD1O95696 1058 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 CTSAP10619 480 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 ATAT1Q5SQI0 421 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 GALNT17Q6IS24 598 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 TMC5Q6UXY8 1006 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 KRT25Q7Z3Z0 450 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 SLC22A17Q8WUG5 538 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 MINDY3Q9H8M7 445 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 RGL1Q9NZL6 768 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 DBR1Q9UK59 544 aaKnown RBP22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 COL4A3BPQ9Y5P4 624 aa22.52■■□□□ 1.2
CLPTM1-204ENST00000585961 CCDC194A0A1B0GVG4 234 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 CCNT1O60563 726 aaKnown RBP22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 ZNF623O75123 536 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 MTHFRP42898 656 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 POLGP54098 1239 aaPredicted RBP22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 MOXD1Q6UVY6 613 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 AGMOQ6ZNB7 445 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 OXER1Q8TDS5 423 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 PGBD4Q96DM1 585 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 NECTIN4Q96NY8 510 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 PRRX2Q99811 253 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 JPH2Q9BR39 696 aaPredicted RBP22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 VN1R3Q9BXE9 311 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 VAV3Q9UKW4 847 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 WDR81Q562E7 1941 aa22.51■■□□□ 1.19
CLPTM1-204ENST00000585961 H0Y858 1186 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 POMCP01189 267 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 ALDH2P05091 517 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 P4HBP07237 508 aaKnown RBP22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 MYBP10242 640 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 LAMTOR4Q0VGL1 99 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 SCRN1Q12765 414 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 PPP2R5CQ13362 524 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 PIK3AP1Q6ZUJ8 805 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 CABP7Q86V35 215 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 SLC7A3Q8WY07 619 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 ATOH1Q92858 354 aaPredicted RBP22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 FAM20AQ96MK3 541 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 PHF20Q9BVI0 1012 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 MYO10Q9HD67 2058 aa22.5■■□□□ 1.19
CLPTM1-204ENST00000585961 SPDYE4A6NLX3 237 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 KLRC2P26717 231 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 HOXA11P31270 313 aaPredicted RBP22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 CTTNQ14247 550 aaKnown RBP22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 NCAPH2Q6IBW4 605 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 NEK8Q86SG6 692 aa22.49■■□□□ 1.19
CLPTM1-204ENST00000585961 URGCPQ8TCY9 931 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms