RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	PRPF31	Q8WWY3	499 aa	Known RBP	18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	AUTS2	Q8WXX7	1259 aa		18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	HAS1	Q92839	578 aa		18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	ASIC4	Q96FT7	647 aa		18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	TMEM169	Q96HH4	297 aa		18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	IGSF21	Q96ID5	467 aa		18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	NLRP4	Q96MN2	994 aa		18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	JPH2	Q9BR39	696 aa	Predicted RBP	18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	SLK	Q9H2G2	1235 aa	Predicted RBP	18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	TBC1D13	Q9NVG8	400 aa		18.34	■□□□□ 0.53
PRKAR1A-206	ENST00000585460	CCDC194	A0A1B0GVG4	234 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	P4HB	P07237	508 aa	Known RBP	18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	SP100	P23497	879 aa	Predicted RBP	18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	BMS1	Q14692	1282 aa	Known RBP	18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	PTPN21	Q16825	1174 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	KANK3	Q6NY19	840 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	GLB1L	Q6UWU2	654 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	MRPL10	Q7Z7H8	261 aa	Known RBP	18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	NEK8	Q86SG6	692 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	ZNF280B	Q86YH2	543 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	FBXL6	Q8N531	539 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	C12orf76	Q8N812	135 aa	Predicted RBP	18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	PRSS33	Q8NF86	280 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	OXER1	Q8TDS5	423 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	BCL7C	Q8WUZ0	217 aa	Predicted RBP	18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	RSPH1	Q8WYR4	309 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	TMEM143	Q96AN5	459 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	CEP170P1	Q96L14	293 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	ZBP1	Q9H171	429 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	DHX33	Q9H6R0	707 aa	Known RBP	18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	MINDY3	Q9H8M7	445 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	INPP5F	Q9Y2H2	1132 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	PCDHB2	Q9Y5E7	798 aa		18.33	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	MYH9	P35579	1960 aa	Known RBP	18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	SRGAP2C	P0DJJ0	459 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	CTSA	P10619	480 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	HOXA11	P31270	313 aa	Predicted RBP	18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	AFF1	P51825	1210 aa	Known RBP	18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	POLG	P54098	1239 aa	Predicted RBP	18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	ITIH3	Q06033	890 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	EPHA7	Q15375	998 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	CES5A	Q6NT32	575 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	AGMO	Q6ZNB7	445 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	SLC22A17	Q8WUG5	538 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	POMK	Q9H5K3	350 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	RGL1	Q9NZL6	768 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	DNAJB4	Q9UDY4	337 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	TPCN1	Q9ULQ1	816 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	COL4A3BP	Q9Y5P4	624 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	IRAK3	Q9Y616	596 aa		18.32	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	ZBTB39	O15060	712 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	B4GALT3	O60512	393 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	CCNT1	O60563	726 aa	Known RBP	18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	PFKFB2	O60825	505 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	DKC1	O60832	514 aa	Known RBP eCLIP	18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	CDKL5	O76039	1030 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	CTDNEP1	O95476	244 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	WEE2	P0C1S8	567 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	GCFC2	P16383	781 aa	Known RBP	18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	CA8	P35219	290 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	SLC11A1	P49279	550 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	RAB27A	P51159	221 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	RNASEL	Q05823	741 aa	Known RBP	18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	LAMTOR4	Q0VGL1	99 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	EARS2	Q5JPH6	523 aa	Known RBP	18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	UBXN11	Q5T124	520 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	PIK3AP1	Q6ZUJ8	805 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	SUGP1	Q8IWZ8	645 aa	Known RBP	18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	C4orf19	Q8IY42	314 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	SLC7A3	Q8WY07	619 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	PGBD4	Q96DM1	585 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	NECTIN4	Q96NY8	510 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	PHOX2B	Q99453	314 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	VN1R3	Q9BXE9	311 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	TSHZ2	Q9NRE2	1034 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	AGPAT5	Q9NUQ2	364 aa		18.31	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	ZNF318	Q5VUA4	2279 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	C2CD4D	B7Z1M9	353 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	TBX3	O15119	743 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	DDHD2	O94830	711 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	EPCAM	P16422	314 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	RARS2	Q5T160	578 aa	Known RBP	18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	SRGAP1	Q7Z6B7	1085 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	EXOC8	Q8IYI6	725 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	PSPC1	Q8WXF1	523 aa	Known RBP	18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	GBP3	Q9H0R5	595 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	NR2E1	Q9Y466	385 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	PPME1	Q9Y570	386 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	WDFY4	Q6ZS81	3184 aa		18.3	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	CARNS1	A5YM72	827 aa		18.29	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	MARCH6	O60337	910 aa		18.29	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	ALDH2	P05091	517 aa		18.29	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	XBP1	P17861	261 aa		18.29	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	AVPR2	P30518	371 aa		18.29	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	YWHAB	P31946	246 aa	Known RBP	18.29	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	RFC5	P40937	340 aa		18.29	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	MTHFR	P42898	656 aa		18.29	■□□□□ 0.52
PRKAR1A-206	ENST00000585460	VCP	P55072	806 aa	Known RBP	18.29	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms