RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 NIFKQ9BYG3 293 aaKnown RBP18.18■□□□□ 0.5
SREBF1-221ENST00000583080 GBP3Q9H0R5 595 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 FAM105AQ9NUU6 356 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 USTQ9Y2C2 406 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 RIF1Q5UIP0 2472 aaKnown RBP18.18■□□□□ 0.5
SREBF1-221ENST00000583080 SPTBN4Q9H254 2564 aa18.18■□□□□ 0.5
SREBF1-221ENST00000583080 C2orf16Q68DN1 1984 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 FAM186AA6NE01 2351 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 TDP2O95551 362 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
SREBF1-221ENST00000583080 XKR3Q5GH77 459 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 GLB1LQ6UWU2 654 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 B3GNT9Q6UX72 402 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 CABP7Q86V35 215 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 RHPN2Q8IUC4 686 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 RNF26Q9BY78 433 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-221ENST00000583080 MFSD1Q9H3U5 465 aa18.17■□□□□ 0.5
SREBF1-221ENST00000583080 NCOA5Q9HCD5 579 aaKnown RBP18.17■□□□□ 0.5
SREBF1-221ENST00000583080 OFD1O75665 1012 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 SSBP05455 408 aaKnown RBP eCLIP18.16■□□□□ 0.5
SREBF1-221ENST00000583080 USP11P51784 963 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 GIT2Q14161 759 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 PLA2G4FQ68DD2 849 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 FRMD5Q7Z6J6 570 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 ZNF410Q86VK4 478 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 ZNF280BQ86YH2 543 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 TBCKQ8TEA7 893 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 KCNB2Q92953 911 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 NLRP4Q96MN2 994 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 SFXN1Q9H9B4 322 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 CYP26B1Q9NR63 512 aa18.16■□□□□ 0.5
SREBF1-221ENST00000583080 SUCLA2Q9P2R7 463 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-221ENST00000583080 CDC45O75419 566 aa18.15■□□□□ 0.5
SREBF1-221ENST00000583080 AFF1P51825 1210 aaKnown RBP18.15■□□□□ 0.5
SREBF1-221ENST00000583080 RNASELQ05823 741 aaKnown RBP18.15■□□□□ 0.5
SREBF1-221ENST00000583080 Q4G0T1 1027 aa18.15■□□□□ 0.5
SREBF1-221ENST00000583080 CCDC149Q6ZUS6 474 aa18.15■□□□□ 0.5
SREBF1-221ENST00000583080 CATSPER4Q7RTX7 472 aa18.15■□□□□ 0.5
SREBF1-221ENST00000583080 GPR149Q86SP6 731 aa18.15■□□□□ 0.5
SREBF1-221ENST00000583080 PLCD3Q8N3E9 789 aa18.15■□□□□ 0.5
SREBF1-221ENST00000583080 FLCNQ8NFG4 579 aa18.15■□□□□ 0.5
SREBF1-221ENST00000583080 RDM1Q8NG50 284 aa18.15■□□□□ 0.5
SREBF1-221ENST00000583080 SNX14Q9Y5W7 946 aa18.15■□□□□ 0.5
SREBF1-221ENST00000583080 VPS13AQ96RL7 3174 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 ZNF623O75123 536 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 MAFO75444 373 aaPredicted RBP18.14■□□□□ 0.49
SREBF1-221ENST00000583080 DDHD2O94830 711 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 CNPP09543 421 aaKnown RBP18.14■□□□□ 0.49
SREBF1-221ENST00000583080 IFNAR1P17181 557 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 NPR3P17342 541 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 DNM2P50570 870 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 RAB27AP51159 221 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 CLCN4P51793 760 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 CCT2P78371 535 aaKnown RBP18.14■□□□□ 0.49
SREBF1-221ENST00000583080 BLOC1S2Q6QNY1 142 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 AGMOQ6ZNB7 445 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 ANO5Q75V66 913 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 ETNPPLQ8TBG4 499 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 RSPH1Q8WYR4 309 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 KLHL5Q96PQ7 755 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 AGXT2Q9BYV1 514 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 IFT122Q9HBG6 1241 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 AGPAT5Q9NUQ2 364 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 PCDHB2Q9Y5E7 798 aa18.14■□□□□ 0.49
SREBF1-221ENST00000583080 GVINP1Q7Z2Y8 2422 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 SPDYE4A6NLX3 237 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 DDX11L8A8MPP1 907 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 PI15O43692 258 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 SKIP12755 728 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 CLCN5P51795 746 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 NLRP5P59047 1200 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 CDC42EP1Q00587 391 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 PPFIBP1Q86W92 1011 aa18.13■□□□□ 0.49
SREBF1-221ENST00000583080 CYP3A7-CYP3A51PA0A087WV96 503 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 EML1O00423 815 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 AOC1P19801 751 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 CYP3A7P24462 503 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 KLRC2P26717 231 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 HSPA4P34932 840 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 OTOP3Q7RTS5 596 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 FBXL16Q8N461 479 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 ZNF579Q8NAF0 562 aaKnown RBP18.12■□□□□ 0.49
SREBF1-221ENST00000583080 URGCPQ8TCY9 931 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 NKD2Q969F2 451 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-221ENST00000583080 ACSF2Q96CM8 615 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-221ENST00000583080 MBOAT7Q96N66 472 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 INO80BQ9C086 356 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-221ENST00000583080 MINDY3Q9H8M7 445 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 RSAD1Q9HA92 442 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 SH3GLB2Q9NR46 395 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 PCDHA4Q9UN74 947 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 DUSP12Q9UNI6 340 aa18.12■□□□□ 0.49
SREBF1-221ENST00000583080 CARNS1A5YM72 827 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 M0R2N6 131 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 NARSO43776 548 aaKnown RBP18.11■□□□□ 0.49
SREBF1-221ENST00000583080 SLC37A4O43826 429 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 LILRB3O75022 631 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 N4BP1O75113 896 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms