RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 NECTIN4Q96NY8 510 aa15.72■□□□□ 0.11
ERBB2-213ENST00000582818 TCF25Q9BQ70 676 aa15.72■□□□□ 0.11
ERBB2-213ENST00000582818 JPH2Q9BR39 696 aaPredicted RBP15.72■□□□□ 0.11
ERBB2-213ENST00000582818 IRF2BPLQ9H1B7 796 aa15.72■□□□□ 0.11
ERBB2-213ENST00000582818 ENTPD7Q9NQZ7 604 aa15.72■□□□□ 0.11
ERBB2-213ENST00000582818 RNF19AQ9NV58 838 aa15.72■□□□□ 0.11
ERBB2-213ENST00000582818 NOL7Q9UMY1 257 aaKnown RBP15.72■□□□□ 0.11
ERBB2-213ENST00000582818 IGKV6-21A0A0C4DH24 114 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 DTNBO60941 627 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 PSMD10O75832 226 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 ALDH7A1P49419 539 aaKnown RBP15.71■□□□□ 0.11
ERBB2-213ENST00000582818 PTPN5P54829 565 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 GUCY1B3Q02153 619 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 GIT2Q14161 759 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 SMC1AQ14683 1233 aaKnown RBP15.71■□□□□ 0.11
ERBB2-213ENST00000582818 B3GNT9Q6UX72 402 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 ZNF410Q86VK4 478 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 EXOC8Q8IYI6 725 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 SLFN12Q8IYM2 578 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 FBXL6Q8N531 539 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 MRPL43Q8N983 215 aaKnown RBP15.71■□□□□ 0.11
ERBB2-213ENST00000582818 GCOM2Q9BZD3 368 aaPredicted RBP15.71■□□□□ 0.11
ERBB2-213ENST00000582818 DDX25Q9UHL0 483 aaKnown RBP15.71■□□□□ 0.11
ERBB2-213ENST00000582818 NR2E1Q9Y466 385 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 PPME1Q9Y570 386 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 PCDHGC5Q9Y5F6 944 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 IRAK3Q9Y616 596 aa15.71■□□□□ 0.11
ERBB2-213ENST00000582818 EDIL3O43854 480 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 MARCH6O60337 910 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 CCNT1O60563 726 aaKnown RBP15.7■□□□□ 0.1
ERBB2-213ENST00000582818 IBSPP21815 317 aaPredicted RBP15.7■□□□□ 0.1
ERBB2-213ENST00000582818 SFPQP23246 707 aaKnown RBP eCLIP15.7■□□□□ 0.1
ERBB2-213ENST00000582818 TECP42680 631 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 RAB27AP51159 221 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 POLGP54098 1239 aaPredicted RBP15.7■□□□□ 0.1
ERBB2-213ENST00000582818 PTPN21Q16825 1174 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 CLLU1OSQ5K130 101 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 PLPP4Q5VZY2 271 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 SYCE2Q6PIF2 218 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 TMC7Q7Z402 723 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 SLC39A11Q8N1S5 342 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 LRRC71Q8N4P6 559 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 NLRP7Q8WX94 980 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 RPGRIP1Q96KN7 1286 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 SCLT1Q96NL6 688 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 PPP1R16BQ96T49 567 aa15.7■□□□□ 0.1
ERBB2-213ENST00000582818 PTPRZ1P23471 2315 aaPredicted RBP15.69■□□□□ 0.1
ERBB2-213ENST00000582818 KMT2EQ8IZD2 1858 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 RIF1Q5UIP0 2472 aaKnown RBP15.69■□□□□ 0.1
ERBB2-213ENST00000582818 DKC1O60832 514 aaKnown RBP eCLIP15.69■□□□□ 0.1
ERBB2-213ENST00000582818 ZNF623O75123 536 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 FOSBP53539 338 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 RILPL1Q5EBL4 403 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 MCTP1Q6DN14 999 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 CES5AQ6NT32 575 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 TRMT1LQ7Z2T5 733 aaKnown RBP15.69■□□□□ 0.1
ERBB2-213ENST00000582818 MIER3Q7Z3K6 550 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 CEP89Q96ST8 783 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 ADAM7Q9H2U9 754 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 UNC45AQ9H3U1 944 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 HCSTQ9UBK5 93 aa15.69■□□□□ 0.1
ERBB2-213ENST00000582818 C2orf71A6NGG8 1288 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 HIDE1A8MVS5 230 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 MTHFRP42898 656 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 PHKA2P46019 1235 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 UGCGQ16739 394 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 BRAPQ7Z569 592 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 UBALD2Q8IYN6 164 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 ASIC4Q96FT7 647 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 TMEM169Q96HH4 297 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 DZANK1Q9NVP4 752 aa15.68■□□□□ 0.1
ERBB2-213ENST00000582818 MAFO75444 373 aaPredicted RBP15.67■□□□□ 0.1
ERBB2-213ENST00000582818 STBD1O95210 358 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 TDP2O95551 362 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 SYT1P21579 422 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 BCAR1P56945 870 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 PSMC5P62195 406 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 EARS2Q5JPH6 523 aaKnown RBP15.67■□□□□ 0.1
ERBB2-213ENST00000582818 GLB1LQ6UWU2 654 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 DDX53Q86TM3 631 aaKnown RBP15.67■□□□□ 0.1
ERBB2-213ENST00000582818 ETNPPLQ8TBG4 499 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 RIPOR3Q96MK2 946 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 KCNMB3Q9NPA1 279 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 SEPT9Q9UHD8 586 aaPredicted RBP15.67■□□□□ 0.1
ERBB2-213ENST00000582818 HCFC2Q9Y5Z7 792 aa15.67■□□□□ 0.1
ERBB2-213ENST00000582818 LAD1O00515 517 aa15.66■□□□□ 0.1
ERBB2-213ENST00000582818 CHMP2AO43633 222 aa15.66■□□□□ 0.1
ERBB2-213ENST00000582818 GAS2O43903 313 aaKnown RBP15.66■□□□□ 0.1
ERBB2-213ENST00000582818 NEMFO60524 1076 aa15.66■□□□□ 0.1
ERBB2-213ENST00000582818 RBM10P98175 930 aaKnown RBP15.66■□□□□ 0.1
ERBB2-213ENST00000582818 PCBP1Q15365 356 aaKnown RBP eCLIP15.66■□□□□ 0.1
ERBB2-213ENST00000582818 PPFIBP1Q86W92 1011 aa15.66■□□□□ 0.1
ERBB2-213ENST00000582818 RNF169Q8NCN4 708 aa15.66■□□□□ 0.1
ERBB2-213ENST00000582818 HELQQ8TDG4 1101 aa15.66■□□□□ 0.1
ERBB2-213ENST00000582818 ZSCAN16Q9H4T2 348 aaPredicted RBP15.66■□□□□ 0.1
ERBB2-213ENST00000582818 SUCLA2Q9P2R7 463 aaPredicted RBP15.66■□□□□ 0.1
ERBB2-213ENST00000582818 PCDHA12Q9UN75 941 aa15.66■□□□□ 0.1
ERBB2-213ENST00000582818 USTQ9Y2C2 406 aa15.66■□□□□ 0.1
ERBB2-213ENST00000582818 FAM186AA6NE01 2351 aa15.66■□□□□ 0.1
ERBB2-213ENST00000582818 ZFHX2Q9C0A1 2572 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms