RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 USP38Q8NB14 1042 aa10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 KIAA0895Q8NCT3 520 aa10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 PRPF31Q8WWY3 499 aaKnown RBP10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 SCLT1Q96NL6 688 aa10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 GCOM2Q9BZD3 368 aaPredicted RBP10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 GBP3Q9H0R5 595 aa10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 DNAJC25Q9H1X3 360 aa10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 KIAA1586Q9HCI6 787 aa10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 TYW1Q9NV66 732 aaKnown RBP10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 SETD4Q9NVD3 440 aa10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 PRMT7Q9NVM4 692 aaPredicted RBP10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 ARHGAP28Q9P2N2 729 aa10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 MAGEC2Q9UBF1 373 aaPredicted RBP10.04□□□□□ -0.8
GAPLINC-203ENST00000581029 FRMPD3Q5JV73 1810 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 DENND3A2RUS2 1198 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 TMEM150BA6NC51 233 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 SFI1A8K8P3 1242 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 RSPH10B2B2RC85 870 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 PPP1R3GB7ZBB8 358 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 CETN3O15182 167 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 TPM3P06753 285 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 RSPH10BP0C881 870 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 GLRA2P23416 452 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 AXLP30530 894 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 PTENP60484 403 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 BFSP2Q13515 415 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 MTFR1Q15390 333 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 PTGISQ16647 500 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 KYAT1Q16773 422 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 FAM187BQ17R55 369 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 MARCH8Q5T0T0 291 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 CDCA2Q69YH5 1023 aaPredicted RBP10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 ISM2Q6H9L7 571 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 ZPBP2Q6X784 338 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 MAP4K3Q8IVH8 894 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 SLC43A3Q8NBI5 491 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 RNF149Q8NC42 400 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 CAGE1Q8TC20 777 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 NELFBQ8WX92 580 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 ERCC4Q92889 916 aaPredicted RBP10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 TMEM143Q96AN5 459 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 CEP63Q96MT8 703 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 CTAGE1Q96RT6 745 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 SH2D3AQ9BRG2 576 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 STRA6Q9BX79 667 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 THAP9Q9H5L6 903 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 TBX20Q9UMR3 447 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 TRAF3IP3Q9Y228 551 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 GDAQ9Y2T3 454 aa10.03□□□□□ -0.8
GAPLINC-203ENST00000581029 DCDC2CA8MYV0 355 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 SLC16A4O15374 487 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 PPP1R37O75864 691 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 ERLIN2O94905 339 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 SFPQP23246 707 aaKnown RBP eCLIP10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 MRE11P49959 708 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 GPC3P51654 580 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 CRYBB1P53674 252 aaPredicted RBP10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 POU5F1Q01860 360 aaKnown RBP10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 KLHL10Q6JEL2 608 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 SERINC5Q86VE9 423 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 SLC9A9Q8IVB4 645 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 C12orf56Q8IXR9 622 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 KIAA0319LQ8IZA0 1049 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 LRRC71Q8N4P6 559 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 TMEM161BQ8NDZ6 487 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 SCFD1Q8WVM8 642 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 NLRP7Q8WX94 980 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 BICD1Q96G01 975 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 NLRP4Q96MN2 994 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 TOX2Q96NM4 488 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 FIZ1Q96SL8 496 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 MKNK1Q9BUB5 465 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 MRPL4Q9BYD3 311 aaKnown RBP10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 METTL14Q9HCE5 456 aaKnown RBP10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 GPRC5CQ9NQ84 441 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 TBC1D7Q9P0N9 293 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 CTNND2Q9UQB3 1225 aa10.02□□□□□ -0.81
GAPLINC-203ENST00000581029 ACKR2O00590 384 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 MAPK13O15264 365 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 TREHO43280 583 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 PRPF6O94906 941 aaKnown RBP10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 PIGRP01833 764 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 SRGAP2CP0DJJ0 459 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 BMP6P22004 513 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 GARTP22102 1010 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 PTGS1P23219 599 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 EIF4BP23588 611 aaKnown RBP10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 EEF1GP26641 437 aaKnown RBP10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 NMT1P30419 496 aaKnown RBP10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 LIG4P49917 911 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 CLCN3P51790 818 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 NLRP11P59045 1033 aaKnown RBP10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 MRPS6P82932 125 aaKnown RBP10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 PPP2R3AQ06190 1150 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 ENPEPQ07075 957 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 CAPSQ13938 189 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 FILIP1LQ4L180 1135 aa10.01□□□□□ -0.81
GAPLINC-203ENST00000581029 NECAB2Q7Z6G3 386 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms