RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 TRIM50Q86XT4 487 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 FMNL3Q8IVF7 1028 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 WDR63Q8IWG1 891 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 ZNF710Q8N1W2 664 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 FGF13Q92913 245 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 PI4K2AQ9BTU6 479 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 SSX2IPQ9Y2D8 614 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 CYP4F3Q08477 520 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 NFX1Q12986 1120 aaKnown RBP7.06□□□□□ -1.28
CCDC178-209ENST00000579947 TMEM266Q2M3C6 531 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 C1orf228Q6PIY5 440 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 ZNF444Q8N0Y2 327 aaPredicted RBP7.06□□□□□ -1.28
CCDC178-209ENST00000579947 NME8Q8N427 588 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 DCBLD2Q96PD2 775 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 ZNF287Q9HBT7 754 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 C2orf42Q9NWW7 574 aa7.06□□□□□ -1.28
CCDC178-209ENST00000579947 GPR182O15218 404 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 RPS6KA5O75582 802 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 TAF1BQ53T94 588 aaPredicted RBP7.05□□□□□ -1.28
CCDC178-209ENST00000579947 TMPRSS7Q7RTY8 843 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 PLA2G2FQ9BZM2 168 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 RXFP1Q9HBX9 757 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 MRPL17Q9NRX2 175 aaKnown RBP7.05□□□□□ -1.28
CCDC178-209ENST00000579947 NOC2LQ9Y3T9 749 aaKnown RBP7.05□□□□□ -1.28
CCDC178-209ENST00000579947 FBN2P35556 2912 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 NUP205Q92621 2012 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 RRN3P2A6NIE6 340 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 FTH1P19P0C7X4 201 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 EIF2AK2P19525 551 aaKnown RBP7.05□□□□□ -1.28
CCDC178-209ENST00000579947 KRT76Q01546 638 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 RHDQ02161 417 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 METTL7BQ6UX53 244 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 LRRC69Q6ZNQ3 347 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 ELSPBP1Q96BH3 223 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 LIN37Q96GY3 246 aaPredicted RBP7.05□□□□□ -1.28
CCDC178-209ENST00000579947 FAM49AQ9H0Q0 323 aaPredicted RBP7.05□□□□□ -1.28
CCDC178-209ENST00000579947 HSPBP1Q9NZL4 362 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 ST3GAL5Q9UNP4 418 aa7.05□□□□□ -1.28
CCDC178-209ENST00000579947 TERTO14746 1132 aaKnown RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 CR2P20023 1033 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 EIF2S3P41091 472 aaKnown RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 IRX4P78413 519 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 UBAP2LQ14157 1087 aaKnown RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 UTP14CQ5TAP6 766 aaKnown RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 TTBK2Q6IQ55 1244 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 SYNPOQ8N3V7 929 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 HERC2P3Q9BVR0 1158 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 SEMA4CQ9C0C4 833 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 TLR7Q9NYK1 1049 aaKnown RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 PCDHA2Q9Y5H9 948 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 SLC4A4Q9Y6R1 1079 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 PIAS3Q9Y6X2 628 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 TNRC6BQ9UPQ9 1833 aaKnown RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 ZMYND10O75800 440 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 UBR5O95071 2799 aaPredicted RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 POU2F2P09086 479 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 HOXC13P31276 330 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 SLC16A2P36021 539 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 CCDC96Q2M329 555 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 PKDCCQ504Y2 493 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 Q6ZS52 159 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 TOGARAM2Q6ZUX3 1019 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 C11orf74Q86VG3 221 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 ECHDC2Q86YB7 292 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 MCF2L2Q86YR7 1114 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 KCNH3Q9ULD8 1083 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 DOCK5Q9H7D0 1870 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 PATE3B3GLJ2 98 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 HSPD1P10809 573 aaKnown RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 TMEM62Q0P6H9 643 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 TBC1D5Q92609 795 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 RPS6KC1Q96S38 1066 aa7.04□□□□□ -1.28
CCDC178-209ENST00000579947 KIAA1522Q9P206 1035 aaPredicted RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 APOBEC2Q9Y235 224 aaKnown RBP7.04□□□□□ -1.28
CCDC178-209ENST00000579947 TEX28O15482 410 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 GALTP07902 379 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 CAMK2BQ13554 666 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 LY6DQ14210 128 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 NEDD9Q14511 834 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 WDR44Q5JSH3 913 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 ZNF746Q6NUN9 644 aaPredicted RBP7.03□□□□□ -1.28
CCDC178-209ENST00000579947 GIMAP6Q6P9H5 292 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 MAP4K3Q8IVH8 894 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 SEPT9Q9UHD8 586 aaPredicted RBP7.03□□□□□ -1.28
CCDC178-209ENST00000579947 SMIM35A0A1B0GVV1 85 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 TRABD2BA6NFA1 517 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 TSPY3P0CV98 308 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 TSPY8P0CW00 308 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 ADD2P35612 726 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 GHRHRQ02643 423 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 TRIP6Q15654 476 aaKnown RBP7.03□□□□□ -1.28
CCDC178-209ENST00000579947 CYP2U1Q7Z449 544 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 GRASPQ7Z6J2 395 aaPredicted RBP7.03□□□□□ -1.28
CCDC178-209ENST00000579947 ZNF598Q86UK7 904 aaKnown RBP7.03□□□□□ -1.28
CCDC178-209ENST00000579947 NPAS3Q8IXF0 933 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 HELQQ8TDG4 1101 aa7.03□□□□□ -1.28
CCDC178-209ENST00000579947 GPKOWQ92917 476 aaPredicted RBP eCLIP7.03□□□□□ -1.28
CCDC178-209ENST00000579947 IRF7Q92985 503 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms