RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 KCNH3Q9ULD8 1083 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 ODF2LQ9ULJ1 636 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 A0A1W2PQ27 194 aa17■□□□□ 0.31
IFT20-208ENST00000578985 A0A1W2PQ64 194 aa17■□□□□ 0.31
IFT20-208ENST00000578985 A0A1W2PQD8 194 aa17■□□□□ 0.31
IFT20-208ENST00000578985 MYMKA6NI61 221 aa17■□□□□ 0.31
IFT20-208ENST00000578985 CCDC169A6NNP5 214 aa17■□□□□ 0.31
IFT20-208ENST00000578985 SOX1O00570 391 aaPredicted RBP17■□□□□ 0.31
IFT20-208ENST00000578985 ERLIN2O94905 339 aa17■□□□□ 0.31
IFT20-208ENST00000578985 FAM13AO94988 1023 aa17■□□□□ 0.31
IFT20-208ENST00000578985 PLS3P13797 630 aa17■□□□□ 0.31
IFT20-208ENST00000578985 NPTX2P47972 431 aa17■□□□□ 0.31
IFT20-208ENST00000578985 DMP1Q13316 513 aaPredicted RBP17■□□□□ 0.31
IFT20-208ENST00000578985 GIT2Q14161 759 aa17■□□□□ 0.31
IFT20-208ENST00000578985 PCBP1Q15365 356 aaKnown RBP eCLIP17■□□□□ 0.31
IFT20-208ENST00000578985 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
IFT20-208ENST00000578985 CDCA2Q69YH5 1023 aaPredicted RBP17■□□□□ 0.31
IFT20-208ENST00000578985 FAM117BQ6P1L5 589 aa17■□□□□ 0.31
IFT20-208ENST00000578985 TMCO2Q7Z6W1 182 aaPredicted RBP17■□□□□ 0.31
IFT20-208ENST00000578985 PYM1Q9BRP8 204 aaKnown RBP17■□□□□ 0.31
IFT20-208ENST00000578985 CHST12Q9NRB3 414 aa17■□□□□ 0.31
IFT20-208ENST00000578985 RGS18Q9NS28 235 aa17■□□□□ 0.31
IFT20-208ENST00000578985 C1orf112Q9NSG2 853 aa17■□□□□ 0.31
IFT20-208ENST00000578985 A0A0C4DFX4 3053 aa17■□□□□ 0.31
IFT20-208ENST00000578985 COL6A3P12111 3177 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 A0A1B0GVL5 298 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 UPP2O95045 317 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 PFKFB1P16118 471 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 RABGGTBP53611 331 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 SLC24A5Q71RS6 500 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 DYMQ7RTS9 669 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 FSIP1Q8NA03 581 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 TOP1MTQ969P6 601 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 ZBED2Q9BTP6 218 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 KIFC3Q9BVG8 833 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 ZHX3Q9H4I2 956 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 KMT5AQ9NQR1 393 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 AGPAT5Q9NUQ2 364 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 DACT1Q9NYF0 836 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 KCNG1Q9UIX4 513 aa16.99■□□□□ 0.31
IFT20-208ENST00000578985 PIN4Q9Y237 131 aaKnown RBP16.99■□□□□ 0.31
IFT20-208ENST00000578985 ADGRA3Q8IWK6 1321 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 FAM237AA0A1B0GTK4 181 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 GOLGA6L4A6NEF3 574 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 C9IYK1 514 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 TSPAN1O60635 241 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 TBCAO75347 108 aaKnown RBP16.98■□□□□ 0.31
IFT20-208ENST00000578985 GJB5O95377 273 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 IBSPP21815 317 aaPredicted RBP16.98■□□□□ 0.31
IFT20-208ENST00000578985 PBX2P40425 430 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 SARSP49591 514 aaKnown RBP16.98■□□□□ 0.31
IFT20-208ENST00000578985 EFNA5P52803 228 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 NCBP1Q09161 790 aaKnown RBP16.98■□□□□ 0.31
IFT20-208ENST00000578985 RAB30Q15771 203 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 MAPK6Q16659 721 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 NPAS4Q8IUM7 802 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 MYCT1Q8N699 235 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 SPIRE2Q8WWL2 714 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 MRPS27Q92552 414 aaKnown RBP16.98■□□□□ 0.31
IFT20-208ENST00000578985 DDX12PQ92771 950 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 NTPCRQ9BSD7 190 aaKnown RBP16.98■□□□□ 0.31
IFT20-208ENST00000578985 LRRC27Q9C0I9 530 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 TNMDQ9H2S6 317 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 FZD8Q9H461 694 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 MAGEF1Q9HAY2 307 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 PARVGQ9HBI0 331 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 PRMT7Q9NVM4 692 aaPredicted RBP16.98■□□□□ 0.31
IFT20-208ENST00000578985 KBTBD4Q9NVX7 518 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 LARSQ9P2J5 1176 aaKnown RBP16.98■□□□□ 0.31
IFT20-208ENST00000578985 MSRAQ9UJ68 235 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 LRFN2Q9ULH4 789 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 HPSEQ9Y251 543 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 PCDHA11Q9Y5I1 949 aa16.98■□□□□ 0.31
IFT20-208ENST00000578985 SLC16A4O15374 487 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 TLL1O43897 1013 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 PRKCBP05771 671 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 STAG3L1P0CL83 205 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 LIG1P18858 919 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 AXLP30530 894 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 HOXA11P31270 313 aaPredicted RBP16.97■□□□□ 0.31
IFT20-208ENST00000578985 SYKP43405 635 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 ZNF131P52739 623 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 SMTNP53814 917 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 FAM189BP81408 668 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 AMPD3Q01432 767 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 AMHR2Q16671 573 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 FAM187BQ17R55 369 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 CSPP1Q1MSJ5 1256 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 TWF2Q6IBS0 349 aaKnown RBP16.97■□□□□ 0.31
IFT20-208ENST00000578985 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 STAMQ92783 540 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 LRCH3Q96II8 777 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 CPB2Q96IY4 423 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 PBX4Q9BYU1 374 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 CCDC113Q9H0I3 377 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
IFT20-208ENST00000578985 ARHGAP28Q9P2N2 729 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 USP25Q9UHP3 1055 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 SERTAD1Q9UHV2 236 aa16.97■□□□□ 0.31
IFT20-208ENST00000578985 PCDHB7Q9Y5E2 793 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms