RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ALG13Q9NP73 1137 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 GPRC5CQ9NQ84 441 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 XPNPEP1Q9NQW7 623 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 TYW1Q9NV66 732 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 LMCD1Q9NZU5 365 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 PUF60Q9UHX1 559 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 INPP5FQ9Y2H2 1132 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 PCDHB2Q9Y5E7 798 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 MRPL42Q9Y6G3 142 aaKnown RBP7.26□□□□□ -1.25
TRAF4-213ENST00000578917 MYO9BQ13459 2157 aa7.26□□□□□ -1.25
TRAF4-213ENST00000578917 TET1Q8NFU7 2136 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 KAT6AQ92794 2004 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 K7ERI5 159 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 LPXNO60711 386 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 EYA4O95677 639 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 ITGA4P13612 1032 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 GLRA2P23416 452 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 MARCKSP29966 332 aaPredicted RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 AXLP30530 894 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 CA8P35219 290 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 LONP1P36776 959 aaKnown RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 TXLNAP40222 546 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 EFNA5P52803 228 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 POU5F1BQ06416 359 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 RAD51AP2Q09MP3 1159 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 CAPSQ13938 189 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 ECM1Q16610 540 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 CSPP1Q1MSJ5 1256 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 AAK1Q2M2I8 961 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 FOXD4L6Q3SYB3 417 aaPredicted RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 FAM173BQ6P4H8 233 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 NOTUMQ6P988 496 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 FOXD4L3Q6VB84 417 aaPredicted RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 KLHL23Q8NBE8 558 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 URGCPQ8TCY9 931 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 HELQQ8TDG4 1101 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 LPPQ93052 612 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 HLA-CQ95604 372 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 PPP2R3CQ969Q6 453 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 MRPL38Q96DV4 380 aaKnown RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 CPB2Q96IY4 423 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 AK8Q96MA6 479 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 ZNF396Q96N95 335 aaPredicted RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 FAM193BQ96PV7 902 aaPredicted RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 APOL6Q9BWW8 343 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 PLVAPQ9BX97 442 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 MRPL9Q9BYD2 267 aaKnown RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 GBP3Q9H0R5 595 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 C2orf40Q9H1Z8 148 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 MINDY3Q9H8M7 445 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 AGPAT5Q9NUQ2 364 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 FAM105AQ9NUU6 356 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 DAXXQ9UER7 740 aaPredicted RBP7.25□□□□□ -1.25
TRAF4-213ENST00000578917 CCDC39Q9UFE4 941 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 KCNG1Q9UIX4 513 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 CLIC4Q9Y696 253 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 SCN5AQ14524 2016 aa7.25□□□□□ -1.25
TRAF4-213ENST00000578917 SFI1A8K8P3 1242 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 NR1I2O75469 434 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 PLA2G4BP0C869 781 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 LAG3P18627 525 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 POU3F3P20264 500 aaPredicted RBP7.24□□□□□ -1.25
TRAF4-213ENST00000578917 NAMPTP43490 491 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 SMTNP53814 917 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 PEX3P56589 373 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 MRPS5P82675 430 aaKnown RBP7.24□□□□□ -1.25
TRAF4-213ENST00000578917 DMP1Q13316 513 aaPredicted RBP7.24□□□□□ -1.25
TRAF4-213ENST00000578917 PRPF4BQ13523 1007 aaKnown RBP7.24□□□□□ -1.25
TRAF4-213ENST00000578917 BECN1Q14457 450 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 BMS1Q14692 1282 aaKnown RBP7.24□□□□□ -1.25
TRAF4-213ENST00000578917 STK38Q15208 465 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 MAPK6Q16659 721 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 NAALADL2Q58DX5 795 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 NOMO2Q5JPE7 1267 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 APBB1IPQ7Z5R6 666 aaPredicted RBP7.24□□□□□ -1.25
TRAF4-213ENST00000578917 CRIPAKQ8N1N5 446 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 LRRC43Q8N309 656 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 CNNM3Q8NE01 707 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 CCDC51Q96ER9 411 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 DRC1Q96MC2 740 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 ZNF558Q96NG5 402 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 CASD1Q96PB1 797 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 ADPGKQ9BRR6 497 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 TCHPQ9BT92 498 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 PANK2Q9BZ23 570 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 ZHX3Q9H4I2 956 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 IGFLR1Q9H665 355 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 UBN1Q9NPG3 1134 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 KMT5AQ9NQR1 393 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 PRMT7Q9NVM4 692 aaPredicted RBP7.24□□□□□ -1.25
TRAF4-213ENST00000578917 SPG21Q9NZD8 308 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 KANSL3Q9P2N6 904 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 THEGQ9P2T0 379 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 TFIP11Q9UBB9 837 aaKnown RBP7.24□□□□□ -1.25
TRAF4-213ENST00000578917 PARP2Q9UGN5 583 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 PLAGL2Q9UPG8 496 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 MTMR6Q9Y217 621 aa7.24□□□□□ -1.25
TRAF4-213ENST00000578917 PRUNE2Q8WUY3 3088 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 226.2 ms